RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CAV3P56539 151 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 BCL6BQ8N143 479 aaPredicted RBP17.41■□□□□ 0.38
PNKP-209ENST00000596726 OR13C3Q8NGS6 347 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 C8orf46Q8TAG6 207 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 TFAP2CQ92754 450 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 GGHQ92820 318 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 BORCS8Q96FH0 119 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 WDFY2Q96P53 400 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 TBX15Q96SF7 602 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 C19orf24Q9BVV8 132 aa17.41■□□□□ 0.38
PNKP-209ENST00000596726 SLC25A10Q9UBX3 287 aaPredicted RBP17.41■□□□□ 0.38
PNKP-209ENST00000596726 EXOSC1Q9Y3B2 195 aaKnown RBP17.41■□□□□ 0.38
PNKP-209ENST00000596726 TRAV40A0A0B4J280 105 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 RFPL4AA6NLU0 287 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 RFPL4AL1F8VTS6 287 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 TOX4O94842 621 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 NXPH2O95156 264 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 SFTPBP07988 381 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 ZNF20P17024 532 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 RBP2P50120 134 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 GTF2A1P52655 376 aaPredicted RBP17.4■□□□□ 0.38
PNKP-209ENST00000596726 OR2G6Q5TZ20 316 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 CD177Q8N6Q3 437 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 ZNRF1Q8ND25 227 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 OR5AK2Q8NH90 309 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 RPS4Y2Q8TD47 263 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 ZFAND2BQ8WV99 257 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 NRG4Q8WWG1 115 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 TMEM80Q96HE8 168 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 PDCD1LG2Q9BQ51 273 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 PLCXD1Q9NUJ7 323 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 MTCH1Q9NZJ7 389 aa17.4■□□□□ 0.38
PNKP-209ENST00000596726 IGHV3OR16-10A0A075B7F0 116 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 TRBV2A0A0J9YWF9 115 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 MT-ND2P03891 347 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 PIPP12273 146 aaPredicted RBP17.39■□□□□ 0.37
PNKP-209ENST00000596726 PRKACBP22694 351 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 AZGP1P25311 298 aaKnown RBP17.39■□□□□ 0.37
PNKP-209ENST00000596726 PRDX2P32119 198 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 ARF6P62330 175 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 CCDC58Q4VC31 144 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 METTL11BQ5VVY1 283 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 XAF1Q6GPH4 301 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 TMPRSS11AQ6ZMR5 421 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 SPSB1Q96BD6 273 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 ZNF48Q96MX3 618 aaPredicted RBP17.39■□□□□ 0.37
PNKP-209ENST00000596726 JMJD8Q96S16 334 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 PCGF1Q9BSM1 259 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 MS4A7Q9GZW8 240 aaPredicted RBP17.39■□□□□ 0.37
PNKP-209ENST00000596726 COMMD4Q9H0A8 199 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 CNOT2Q9NZN8 540 aaKnown RBP17.39■□□□□ 0.37
PNKP-209ENST00000596726 CLEC2DQ9UHP7 191 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 KPTNQ9Y664 436 aa17.39■□□□□ 0.37
PNKP-209ENST00000596726 F8VVB4 439 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 F8VWA3 439 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 H0YJX3 145 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 MYL12AP19105 171 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 ATP1B3P54709 279 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 BPIFB3P59826 476 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 RPL22L1Q6P5R6 122 aaKnown RBP17.38■□□□□ 0.37
PNKP-209ENST00000596726 LHFPL2Q6ZUX7 228 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 BATF2Q8N1L9 274 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 PARP16Q8N5Y8 322 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 SIGLECL1Q8N7X8 197 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 ZDHHC22Q8N966 263 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 CEP19Q96LK0 163 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 OPALINQ96PE5 141 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 ESM1Q9NQ30 184 aa17.38■□□□□ 0.37
PNKP-209ENST00000596726 SOX21Q9Y651 276 aaPredicted RBP17.38■□□□□ 0.37
PNKP-209ENST00000596726 OGG1O15527 345 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 ALX3O95076 343 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 KNG1P01042 644 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 MTCP1P56278 107 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 ST3GAL4Q11206 333 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 CDK5R1Q15078 307 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 PDCD1Q15116 288 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 SLC25A26Q70HW3 274 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 ZNF561Q8N587 486 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 KIR3DL3Q8N743 410 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 ZNF485Q8NCK3 441 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 OR52N1Q8NH53 320 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 H1FXQ92522 213 aaKnown RBP17.37■□□□□ 0.37
PNKP-209ENST00000596726 RGP1Q92546 391 aaPredicted RBP17.37■□□□□ 0.37
PNKP-209ENST00000596726 SLAMF9Q96A28 289 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 ZCCHC4Q9H5U6 513 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 BABAM2Q9NXR7 383 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 PSORS1C1Q9UIG5 152 aa17.37■□□□□ 0.37
PNKP-209ENST00000596726 SIRT4Q9Y6E7 314 aaPredicted RBP17.37■□□□□ 0.37
PNKP-209ENST00000596726 CENPVL3A0A0U1RRI6 287 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 EFCAB10A6NFE3 127 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 XPNPEP2O43895 674 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 LALBAP00709 142 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 NDUFB7P17568 137 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 CEBPDP49716 269 aaPredicted RBP17.36■□□□□ 0.37
PNKP-209ENST00000596726 GPR157Q5UAW9 335 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 CRIP3Q6Q6R5 217 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 SERPINA12Q8IW75 414 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 MKXQ8IYA7 352 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 TMEM185AQ8NFB2 350 aa17.36■□□□□ 0.37
PNKP-209ENST00000596726 AQP4P55087 323 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms