RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 CLVS2Q5SYC1 327 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 ZBTB37Q5TC79 503 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 TMEM42Q69YG0 159 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 ZNF322Q6U7Q0 402 aaPredicted RBP12.99□□□□□ -0.33
LIM2-202ENST00000596399 SPATA24Q86W54 205 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 ZNF573Q86YE8 665 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 AQP12AQ8IXF9 295 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 OR14K1Q8NGZ2 314 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 TRMT10AQ8TBZ6 339 aaKnown RBP12.99□□□□□ -0.33
LIM2-202ENST00000596399 OR5M11Q96RB7 305 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 CNN2Q99439 309 aaKnown RBP12.99□□□□□ -0.33
LIM2-202ENST00000596399 MMP28Q9H239 520 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 RANBP3Q9H6Z4 567 aaPredicted RBP12.99□□□□□ -0.33
LIM2-202ENST00000596399 HES4Q9HCC6 221 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 SLC22A13Q9Y226 551 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 LOC110117498-PIK3R3F6TDL0 507 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 MITFO75030 526 aaPredicted RBP12.98□□□□□ -0.33
LIM2-202ENST00000596399 NOS1APO75052 506 aaPredicted RBP12.98□□□□□ -0.33
LIM2-202ENST00000596399 FKBP6O75344 327 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 ZNF254O75437 659 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 EPHA2P29317 976 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 ERVK11-1P61568 191 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 COL10A1Q03692 680 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
LIM2-202ENST00000596399 SSX2Q16385 188 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 ELMOD2Q8IZ81 293 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 ASB17Q8WXJ9 295 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 RAB18Q9NP72 206 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 OR52A1Q9UKL2 312 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 V9GYS6 101 aa12.98□□□□□ -0.33
LIM2-202ENST00000596399 A0A1W2PPH5 198 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 FAM230AA0A1W2PPH8 454 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 ADARB2-AS1A8MUL3 147 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 C17orf98A8MV24 154 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 ODF3BA8MYP8 253 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 DLGAP1O14490 977 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 RPP14O95059 124 aaKnown RBP12.97□□□□□ -0.33
LIM2-202ENST00000596399 ARG1P05089 322 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 BCL2L15Q5TBC7 163 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 LCN1P1Q5VSP4 162 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 C11orf88Q6PI97 169 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 MEPCEQ7L2J0 689 aaKnown RBP12.97□□□□□ -0.33
LIM2-202ENST00000596399 SSX6Q7RTT6 188 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 ASCC1Q8N9N2 400 aaKnown RBP12.97□□□□□ -0.33
LIM2-202ENST00000596399 CCDC197Q8NCU1 140 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 CDCA4Q9BXL8 241 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 TEX12Q9BXU0 123 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 ADGRL4Q9HBW9 690 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 PAPOLBQ9NRJ5 636 aaKnown RBP12.97□□□□□ -0.33
LIM2-202ENST00000596399 DNAJB9Q9UBS3 223 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 MRM2Q9UI43 246 aaKnown RBP12.97□□□□□ -0.33
LIM2-202ENST00000596399 TCF19Q9Y242 345 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 TMEM14AQ9Y6G1 99 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 R4GMQ9 66 aa12.97□□□□□ -0.33
LIM2-202ENST00000596399 IGKV1-27A0A075B6S5 117 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 A6NDX4 124 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 VGLL3A8MV65 326 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 K7N7A8 449 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 ZNF737O75373 536 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 FBXO24O75426 580 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 MPZP25189 248 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 EDDM3BP56851 147 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 BLCAPP62952 87 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 FLOT2Q14254 428 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 FAHD1Q6P587 224 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 TCF23Q7RTU1 214 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 TPRX1Q8N7U7 411 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 TCEANCQ8N8B7 351 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 CITED2Q99967 270 aaPredicted RBP12.96□□□□□ -0.33
LIM2-202ENST00000596399 CADM1Q9BY67 442 aaKnown RBP12.96□□□□□ -0.33
LIM2-202ENST00000596399 MTCH1Q9NZJ7 389 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 IL36RNQ9UBH0 155 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 POLDIP2Q9Y2S7 368 aa12.96□□□□□ -0.33
LIM2-202ENST00000596399 hCG_1809904A0A1W2PP81 198 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 A0A1W2PPE2 198 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 A0A1W2PR64 198 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 A0A1W2PRV1 198 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 TMEM82A0PJX8 343 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 ZNF728P0DKX0 622 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 DYNC1I2Q13409 638 aaKnown RBP12.95□□□□□ -0.34
LIM2-202ENST00000596399 CNN3Q15417 329 aaKnown RBP12.95□□□□□ -0.34
LIM2-202ENST00000596399 UBE2V2Q15819 145 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 AADACL4Q5VUY2 407 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 Q8N2B8 174 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 WIPF2Q8TF74 440 aaPredicted RBP12.95□□□□□ -0.34
LIM2-202ENST00000596399 SLAMF9Q96A28 289 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 R3HDM4Q96D70 268 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 IL4I1Q96RQ9 567 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 TBX5Q99593 518 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 HILPDAQ9Y5L2 63 aa12.95□□□□□ -0.34
LIM2-202ENST00000596399 TCRBV3S1A0A5B6 114 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 PIN1P1O15428 100 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 APOL3O95236 402 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 FAM107AO95990 144 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 IGHV1-8P0DP01 117 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 CALCBP10092 127 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 EFNB1P98172 346 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms