RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ZNF273Q14593 569 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 KDM4DQ6B0I6 523 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 ZNF782Q6ZMW2 699 aaPredicted RBP13.86□□□□□ -0.19
CCDC9-202ENST00000595659 CALHM1Q8IU99 346 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 ZNF561Q8N587 486 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 C11orf42Q8N5U0 333 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 ITFG2Q969R8 447 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 MNTQ99583 582 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 NRIP2Q9BQI9 281 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 MOB1AQ9H8S9 216 aa13.86□□□□□ -0.19
CCDC9-202ENST00000595659 A0A1W2PQL4 384 aaPredicted RBP13.85□□□□□ -0.19
CCDC9-202ENST00000595659 F8VVB4 439 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 F8VWA3 439 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 NOS1APO75052 506 aaPredicted RBP13.85□□□□□ -0.19
CCDC9-202ENST00000595659 KRT8P05787 483 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 FASP25445 335 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 GABRA5P31644 462 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 BNIP1Q12981 228 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 OCLNQ16625 522 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 PLA1AQ53H76 456 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 C1QL4Q86Z23 238 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 ZDHHC13Q8IUH4 622 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 GID4Q8IVV7 300 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 CIB1Q99828 191 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 POLDIP2Q9Y2S7 368 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 AP4S1Q9Y587 144 aa13.85□□□□□ -0.19
CCDC9-202ENST00000595659 TK1P04183 234 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 COL10A1Q03692 680 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 LRRC75BQ2VPJ9 315 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 LHFPL4Q7Z7J7 247 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 ASCC1Q8N9N2 400 aaKnown RBP13.84□□□□□ -0.19
CCDC9-202ENST00000595659 OR10H4Q8NGA5 316 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 FAM234AQ9H0X4 552 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 RIBC2Q9H4K1 309 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 HEXA-AS1Q9H8Q6 139 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 HES4Q9HCC6 221 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 FAM53CQ9NYF3 392 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 FOXJ3Q9UPW0 622 aa13.84□□□□□ -0.19
CCDC9-202ENST00000595659 A0A1W2PPH5 198 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 SYT7O43581 403 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 LGALS4P56470 323 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 UBE2V2Q15819 145 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 C1orf146Q5VVC0 180 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 Q6ZSR3 168 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 CATSPERDQ86XM0 798 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 RDH10Q8IZV5 341 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 SLAMF9Q96A28 289 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 GABARAPL1Q9H0R8 117 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 MEGF9Q9H1U4 602 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 PLEKHA1Q9HB21 404 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 USE1Q9NZ43 259 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 MTCH1Q9NZJ7 389 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 FBLN5Q9UBX5 448 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 WARS2Q9UGM6 360 aaKnown RBP13.83□□□□□ -0.2
CCDC9-202ENST00000595659 SLC7A11Q9UPY5 501 aa13.83□□□□□ -0.2
CCDC9-202ENST00000595659 IGKV1-27A0A075B6S5 117 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 METTL15A6NJ78 407 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 SAC3D1A6NKF1 404 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 OR2T7P0C7T2 308 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 CCL1P22362 96 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 MPZP25189 248 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 HTR1FP30939 366 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 ATP6V1E1P36543 226 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 RAB13P51153 203 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 ERVK11-1P61568 191 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 DYNAPQ8N1N2 210 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 PRSS35Q8N3Z0 413 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 PIFOQ8TCI5 191 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 NKX3-1Q99801 234 aaPredicted RBP13.82□□□□□ -0.2
CCDC9-202ENST00000595659 PKIBQ9C010 78 aa13.82□□□□□ -0.2
CCDC9-202ENST00000595659 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC9-202ENST00000595659 VWFP04275 2813 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 hCG_1809904A0A1W2PP81 198 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 A0A1W2PPE2 198 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 A0A1W2PR64 198 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 A0A1W2PRV1 198 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 K7N7A8 449 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 CHST1O43916 411 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 CALCBP10092 127 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 DLX6P56179 175 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 EDDM3BP56851 147 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 IL24Q13007 206 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 TP53I3Q53FA7 332 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 CRIP3Q6Q6R5 217 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 OR4C13Q8NGP0 309 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 EME1Q96AY2 570 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 CEP19Q96LK0 163 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 ADI1Q9BV57 179 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 IL36RNQ9UBH0 155 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 OAZ3Q9UMX2 235 aa13.81□□□□□ -0.2
CCDC9-202ENST00000595659 MEGF11A6BM72 1044 aa13.8□□□□□ -0.2
CCDC9-202ENST00000595659 DHRS7CA6NNS2 312 aa13.8□□□□□ -0.2
CCDC9-202ENST00000595659 ARG1P05089 322 aa13.8□□□□□ -0.2
CCDC9-202ENST00000595659 CSF1P09603 554 aa13.8□□□□□ -0.2
CCDC9-202ENST00000595659 KIR2DS4P43632 304 aa13.8□□□□□ -0.2
CCDC9-202ENST00000595659 EDDM3AQ14507 147 aa13.8□□□□□ -0.2
CCDC9-202ENST00000595659 C2orf68Q2NKX9 166 aa13.8□□□□□ -0.2
CCDC9-202ENST00000595659 SLC25A26Q70HW3 274 aa13.8□□□□□ -0.2
CCDC9-202ENST00000595659 GNG8Q9UK08 70 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms