RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 ERVK11-1P61568 191 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 ACTC1P68032 377 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 ACTA1P68133 377 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 ZNF91Q05481 1191 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 IL24Q13007 206 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 ZNF273Q14593 569 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 SMIM21Q3B7S5 101 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 SLC25A30Q5SVS4 291 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 MEDAGQ5VYS4 303 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 RNF144BQ7Z419 303 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 FAM220AQ7Z4H9 259 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 CMTM4Q8IZR5 234 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 FAM185AQ8N0U4 392 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 PQLC1Q8N2U9 271 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 SVOPQ8N4V2 548 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 ZNF561Q8N587 486 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 TMEM86BQ8N661 226 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 OR4M1Q8NGD0 313 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 OR2G2Q8NGZ5 317 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 OR10AC1Q8NH08 325 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 APH1BQ8WW43 257 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 TRUB1Q8WWH5 349 aaKnown RBP4.79□□□□□ -1.64
SSX4B-201ENST00000595235 SLAMF9Q96A28 289 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 LGALS12Q96DT0 336 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 PELI1Q96FA3 418 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 C4orf36Q96KX1 117 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 DMRTB1Q96MA1 342 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 C9orf16Q9BUW7 83 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 ZNF747Q9BV97 191 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 PKIBQ9C010 78 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 CHST5Q9GZS9 411 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 PLEKHA1Q9HB21 404 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 RASL12Q9NYN1 266 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 MTCH1Q9NZJ7 389 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 C1RLQ9NZP8 487 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 FRRS1LQ9P0K9 344 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 ZNRD1Q9P1U0 126 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 IL36RNQ9UBH0 155 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 OR14J1Q9UGF5 321 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.79□□□□□ -1.64
SSX4B-201ENST00000595235 EXOGQ9Y2C4 368 aaKnown RBP4.79□□□□□ -1.64
SSX4B-201ENST00000595235 POLDIP2Q9Y2S7 368 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 ORC6Q9Y5N6 252 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 GMPPBQ9Y5P6 360 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 POMT1Q9Y6A1 747 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 COL6A5A8TX70 2615 aa4.79□□□□□ -1.64
SSX4B-201ENST00000595235 TRBV23-1A0A0A0MS06 115 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 MEX3AA1L020 520 aaKnown RBP4.78□□□□□ -1.64
SSX4B-201ENST00000595235 J3QLW9 94 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 M0R1W7 72 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 SLC1A7O00341 560 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 EBAG9O00559 213 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 SLC16A6O15403 523 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 GPR137BO60478 399 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 GATBO75879 557 aaKnown RBP4.78□□□□□ -1.64
SSX4B-201ENST00000595235 INMTO95050 263 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 KNG1P01042 644 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 IGHA1P01876 353 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 TK1P04183 234 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 HTR1AP08908 422 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 UBCP0CG48 685 aaKnown RBP4.78□□□□□ -1.64
SSX4B-201ENST00000595235 CALCBP10092 127 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 PIPP12273 146 aaPredicted RBP4.78□□□□□ -1.64
SSX4B-201ENST00000595235 CCL3L1P16619 93 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 ZNF19P17023 458 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 SAA4P35542 130 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 CAPZA1P52907 286 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 RAG2P55895 527 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 COL10A1Q03692 680 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 SRSF4Q08170 494 aaKnown RBP4.78□□□□□ -1.64
SSX4B-201ENST00000595235 TAF9Q16594 264 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 TMEM200BQ69YZ2 307 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 FDX2Q6P4F2 183 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 SHISA2Q6UWI4 295 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 SLC25A26Q70HW3 274 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 TCF23Q7RTU1 214 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 LHFPL3Q86UP9 236 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 MKXQ8IYA7 352 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 C11orf42Q8N5U0 333 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 OR51A4Q8NGJ6 313 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 C17orf50Q8WW18 174 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 SSMEM1Q8WWF3 244 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 WFDC12Q8WWY7 111 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 C10orf35Q96D05 121 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 BORCS8Q96FH0 119 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 AJUBAQ96IF1 538 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 CEP19Q96LK0 163 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 ZNF649Q9BS31 505 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 ADI1Q9BV57 179 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 ALG8Q9BVK2 526 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 METTL8Q9H825 291 aaKnown RBP4.78□□□□□ -1.64
SSX4B-201ENST00000595235 ISG20L2Q9H9L3 353 aaKnown RBP4.78□□□□□ -1.64
SSX4B-201ENST00000595235 AMBNQ9NP70 447 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 RBFOX1Q9NWB1 397 aaKnown RBP4.78□□□□□ -1.64
SSX4B-201ENST00000595235 FAM118AQ9NWS6 357 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 SLC7A11Q9UPY5 501 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 MYRFQ9Y2G1 1151 aa4.78□□□□□ -1.64
SSX4B-201ENST00000595235 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
SSX4B-201ENST00000595235 IGKV1-12A0A0C4DH73 117 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms