RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DNAH3Q8TD57 4116 aa13.19□□□□□ -0.3
LIG1-205ENST00000593425 GNGT2O14610 69 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 JUNBP17275 347 aaPredicted RBP13.18□□□□□ -0.3
LIG1-205ENST00000593425 PRKACGP22612 351 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
LIG1-205ENST00000593425 LOXL3P58215 753 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 EMX1Q04741 257 aaPredicted RBP13.18□□□□□ -0.3
LIG1-205ENST00000593425 SSX2Q16385 188 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 ZNF829Q3KNS6 432 aaPredicted RBP13.18□□□□□ -0.3
LIG1-205ENST00000593425 ZNF626Q68DY1 528 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 ASRGL1Q7L266 308 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 DTX3Q8N9I9 347 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 CANT1Q8WVQ1 401 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 SGCDQ92629 289 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 NSL1Q96IY1 281 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 LRGUKQ96M69 825 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 OR5M11Q96RB7 305 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 WNT10AQ9GZT5 417 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 IKZF2Q9UKS7 526 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
LIG1-205ENST00000593425 TBL2Q9Y4P3 447 aaKnown RBP13.18□□□□□ -0.3
LIG1-205ENST00000593425 A6NIN4 97 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 MAGEB4O15481 346 aaPredicted RBP13.17□□□□□ -0.3
LIG1-205ENST00000593425 ZNF254O75437 659 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 MPZP25189 248 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 SNAPC1Q16533 368 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 TMEM95Q3KNT9 176 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 CLVS2Q5SYC1 327 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 PLEKHG7Q6ZR37 379 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 TCF23Q7RTU1 214 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 OR4F17Q8NGA8 305 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 RPS4Y2Q8TD47 263 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 FOXRED1Q96CU9 486 aaPredicted RBP13.17□□□□□ -0.3
LIG1-205ENST00000593425 OR4F4Q96R69 305 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 ZNF556Q9HAH1 456 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 ABCB10Q9NRK6 738 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 TVP23BQ9NYZ1 205 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 GTF2A1LQ9UNN4 478 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 V9GYS6 101 aa13.17□□□□□ -0.3
LIG1-205ENST00000593425 A0A1B0GTI1 187 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 LOC110117498-PIK3R3F6TDL0 507 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 K7N7A8 449 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 DLGAP1O14490 977 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 E2F6O75461 281 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 ZNF728P0DKX0 622 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 ERVK11-1P61568 191 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 ESRRGP62508 458 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 BLCAPP62952 87 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 COL10A1Q03692 680 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 LCN1P1Q5VSP4 162 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 ANGPTL5Q86XS5 388 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 ASCC1Q8N9N2 400 aaKnown RBP13.16□□□□□ -0.3
LIG1-205ENST00000593425 OR11H6Q8NGC7 330 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 OR13D1Q8NGV5 346 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 OR14K1Q8NGZ2 314 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 ASB17Q8WXJ9 295 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 MALSU1Q96EH3 234 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 PRSS22Q9GZN4 317 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 TMEM14AQ9Y6G1 99 aa13.16□□□□□ -0.3
LIG1-205ENST00000593425 F8VVB4 439 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 F8VWA3 439 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 ZNF737O75373 536 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 IGHV1-8P0DP01 117 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 ANXA8P13928 327 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 EDDM3BP56851 147 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 FOXB2Q5VYV0 432 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 BCDIN3DQ7Z5W3 292 aaKnown RBP13.15□□□□□ -0.3
LIG1-205ENST00000593425 ELMOD2Q8IZ81 293 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 TRMT10AQ8TBZ6 339 aaKnown RBP13.15□□□□□ -0.3
LIG1-205ENST00000593425 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 PITPNC1Q9UKF7 332 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 OR52A1Q9UKL2 312 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 SLC22A13Q9Y226 551 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 R4GMQ9 66 aa13.15□□□□□ -0.3
LIG1-205ENST00000593425 M0R129 80 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 PRKYO43930 277 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 PEX14O75381 377 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 RBP4P02753 201 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 T-ENOLP0DO92 83 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 CALB2P22676 271 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 DYNLT3P51808 116 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 CXCR4P61073 352 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 IL24Q13007 206 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 DYNC1I2Q13409 638 aaKnown RBP13.14□□□□□ -0.31
LIG1-205ENST00000593425 BCL2L15Q5TBC7 163 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 ZNF322Q6U7Q0 402 aaPredicted RBP13.14□□□□□ -0.31
LIG1-205ENST00000593425 Q6ZSR3 168 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 CNN2Q99439 309 aaKnown RBP13.14□□□□□ -0.31
LIG1-205ENST00000593425 TEX12Q9BXU0 123 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 PKIBQ9C010 78 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 MOB1AQ9H8S9 216 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 HILPDAQ9Y5L2 63 aa13.14□□□□□ -0.31
LIG1-205ENST00000593425 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 AQP12BA6NM10 295 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 ATP8B1O43520 1251 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 IGLL1P15814 213 aa13.13□□□□□ -0.31
LIG1-205ENST00000593425 VDAC2P45880 294 aaPredicted RBP13.13□□□□□ -0.31
LIG1-205ENST00000593425 CRISP1P54107 249 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms