RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RANBP3Q9H6Z4 567 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-207ENST00000593089 ADGRL4Q9HBW9 690 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 H2AFY2Q9P0M6 372 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-207ENST00000593089 OR52A1Q9UKL2 312 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 POMPQ9Y244 141 aa16.61■□□□□ 0.25
TRIM47-207ENST00000593089 A0A1B0GTI1 187 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 CHST1O43916 411 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 TK1P04183 234 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 ACTR3P61158 418 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 DNAL1Q4LDG9 190 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 PLA1AQ53H76 456 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 C11orf88Q6PI97 169 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 LHFPL4Q7Z7J7 247 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 ANGPTL5Q86XS5 388 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 CALHM1Q8IU99 346 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 TCEANCQ8N8B7 351 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 TRMT10AQ8TBZ6 339 aaKnown RBP16.6■□□□□ 0.25
TRIM47-207ENST00000593089 HES4Q9HCC6 221 aa16.6■□□□□ 0.25
TRIM47-207ENST00000593089 MEX3AA1L020 520 aaKnown RBP16.59■□□□□ 0.25
TRIM47-207ENST00000593089 ZNF670-ZNF695F2Z2N8 137 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 G3V4G9 280 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 MITFO75030 526 aaPredicted RBP16.59■□□□□ 0.25
TRIM47-207ENST00000593089 VSIG10L2P0DP72 767 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 NXNL2Q5VZ03 156 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 PIFOQ8TCI5 191 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 MNTQ99583 582 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 NPFFR1Q9GZQ6 430 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 CLN6Q9NWW5 311 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 MRM2Q9UI43 246 aaKnown RBP16.59■□□□□ 0.25
TRIM47-207ENST00000593089 SLC22A13Q9Y226 551 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 SNX5Q9Y5X3 404 aa16.59■□□□□ 0.25
TRIM47-207ENST00000593089 FAM230AA0A1W2PPH8 454 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 MEGF11A6BM72 1044 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 H3BSH0 61 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 RPP14O95059 124 aaKnown RBP16.58■□□□□ 0.24
TRIM47-207ENST00000593089 MPZP25189 248 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 COL10A1Q03692 680 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 ODF4Q2M2E3 257 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 AADACL4Q5VUY2 407 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 LIAT1Q6ZQX7 453 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 DYNAPQ8N1N2 210 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 ASCC1Q8N9N2 400 aaKnown RBP16.58■□□□□ 0.24
TRIM47-207ENST00000593089 TMEM163Q8TC26 289 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 CFHR4Q92496 578 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 UTP4Q969X6 686 aaKnown RBP16.58■□□□□ 0.24
TRIM47-207ENST00000593089 TBX5Q99593 518 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 KRT84Q9NSB2 600 aa16.58■□□□□ 0.24
TRIM47-207ENST00000593089 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRIM47-207ENST00000593089 ARG1P05089 322 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 EPHA2P29317 976 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 RAB13P51153 203 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 DLX6P56179 175 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 ERVK11-1P61568 191 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 SLX4IPQ5VYV7 408 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 SSX6Q7RTT6 188 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 YIPF7Q8N8F6 280 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 SLC7A6OSQ96CW6 309 aaPredicted RBP16.57■□□□□ 0.24
TRIM47-207ENST00000593089 IL4I1Q96RQ9 567 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 PKIBQ9C010 78 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 PLEKHA1Q9HB21 404 aa16.57■□□□□ 0.24
TRIM47-207ENST00000593089 DHRS7CA6NNS2 312 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 C17orf98A8MV24 154 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 K7N7A8 449 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 DNAJC8O75937 253 aaPredicted RBP16.56■□□□□ 0.24
TRIM47-207ENST00000593089 INMTO95050 263 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 OPN1MWP04001 364 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 OPN1MW2P0DN77 364 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 OPN1MW3P0DN78 364 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 EDDM3BP56851 147 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 EFNB1P98172 346 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 IL24Q13007 206 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 HABP2Q14520 560 aaPredicted RBP16.56■□□□□ 0.24
TRIM47-207ENST00000593089 FAM189A2Q15884 450 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 BEAN1Q3B7T3 259 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 C12orf73Q69YU5 71 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 Q6ZSR3 168 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 LYG1Q8N1E2 194 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 SLC7A11Q9UPY5 501 aa16.56■□□□□ 0.24
TRIM47-207ENST00000593089 PLXNB1O43157 2135 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 FAM90A8PA6NJQ4 464 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 ZAR1LA6NP61 321 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 F8VVB4 439 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 F8VWA3 439 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 KRT8P05787 483 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 CHRM2P08172 466 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 CCL1P22362 96 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 GID4Q8IVV7 300 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 OR13D1Q8NGV5 346 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 CADM1Q9BY67 442 aaKnown RBP16.55■□□□□ 0.24
TRIM47-207ENST00000593089 ZNF702PQ9H963 129 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 ABCB10Q9NRK6 738 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 TCF19Q9Y242 345 aa16.55■□□□□ 0.24
TRIM47-207ENST00000593089 DSCAML1Q8TD84 2053 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 VGLL3A8MV65 326 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 G3V2T6 193 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 SYT7O43581 403 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 ZNF728P0DKX0 622 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 SSX2Q16385 188 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 CCBE1Q6UXH8 406 aaPredicted RBP16.54■□□□□ 0.24
TRIM47-207ENST00000593089 GDPD3Q7L5L3 318 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms