RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 POU3F4P49335 361 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 CEBPDP49716 269 aaPredicted RBP11.52□□□□□ -0.57
CLIP3-205ENST00000592017 CAPZA1P52907 286 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 DGUOKQ16854 277 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 XAF1Q6GPH4 301 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 ACP7Q6ZNF0 438 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 ZNF788Q6ZQV5 615 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 AHSA2Q719I0 299 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 PNLDC1Q8NA58 520 aaKnown RBP11.52□□□□□ -0.57
CLIP3-205ENST00000592017 TMEM185AQ8NFB2 350 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 BPIFB6Q8NFQ5 453 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 OR13C9Q8NGT0 318 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 TFAP2CQ92754 450 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 GGHQ92820 318 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 SLAMF9Q96A28 289 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 RFT1Q96AA3 541 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 MED30Q96HR3 178 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 ZNF48Q96MX3 618 aaPredicted RBP11.52□□□□□ -0.57
CLIP3-205ENST00000592017 JMJD8Q96S16 334 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 NRIP2Q9BQI9 281 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 PKIBQ9C010 78 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 DNTTIP1Q9H147 329 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 ELL3Q9HB65 397 aaPredicted RBP11.52□□□□□ -0.57
CLIP3-205ENST00000592017 RASL12Q9NYN1 266 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 ONECUT1Q9UBC0 465 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 SLC25A10Q9UBX3 287 aaPredicted RBP11.52□□□□□ -0.57
CLIP3-205ENST00000592017 OR14J1Q9UGF5 321 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 CLEC2DQ9UHP7 191 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 DHDHQ9UQ10 334 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 IGKV1-9A0A0C4DH69 117 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 TMEM89A2RUT3 159 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 EFCAB10A6NFE3 127 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 RFPL4AA6NLU0 287 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 RFPL4AL1F8VTS6 287 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 HAX1O00165 279 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 SIGLEC5O15389 551 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 TOX4O94842 621 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 ECDO95905 644 aaPredicted RBP11.51□□□□□ -0.57
CLIP3-205ENST00000592017 SFTPBP07988 381 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 MPZP25189 248 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 TGM4P49221 684 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 RBP2P50120 134 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 ATP1B3P54709 279 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 MTCP1P56278 107 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 UBA52P62987 128 aaKnown RBP11.51□□□□□ -0.57
CLIP3-205ENST00000592017 ST3GAL4Q11206 333 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 IL24Q13007 206 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 ATPAF1Q5TC12 328 aaPredicted RBP11.51□□□□□ -0.57
CLIP3-205ENST00000592017 METTL11BQ5VVY1 283 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 LAIR2Q6ISS4 152 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 C12orf54Q6X4T0 127 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 SLC25A26Q70HW3 274 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 EGFL6Q8IUX8 553 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 STX19Q8N4C7 294 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 ZNRF1Q8ND25 227 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 HAVCR2Q8TDQ0 301 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 GATAD2BQ8WXI9 593 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 SPSB1Q96BD6 273 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 UPRTQ96BW1 309 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 MS4A7Q9GZW8 240 aaPredicted RBP11.51□□□□□ -0.57
CLIP3-205ENST00000592017 RPUSD1Q9UJJ7 312 aaKnown RBP11.51□□□□□ -0.57
CLIP3-205ENST00000592017 ZNF222Q9UK12 451 aa11.51□□□□□ -0.57
CLIP3-205ENST00000592017 ZNF879B4DU55 563 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 NOS1APO75052 506 aaPredicted RBP11.5□□□□□ -0.57
CLIP3-205ENST00000592017 LIPFP07098 398 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 ACAA1P09110 424 aaPredicted RBP11.5□□□□□ -0.57
CLIP3-205ENST00000592017 PPIAL4GP0DN37 164 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 PIPP12273 146 aaPredicted RBP11.5□□□□□ -0.57
CLIP3-205ENST00000592017 PRKACBP22694 351 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 SOX2P48431 317 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 COMPP49747 757 aaPredicted RBP11.5□□□□□ -0.57
CLIP3-205ENST00000592017 ARF6P62330 175 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 ACTG1P63261 375 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 CDK5R1Q15078 307 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 RPL22L1Q6P5R6 122 aaKnown RBP11.5□□□□□ -0.57
CLIP3-205ENST00000592017 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 UTS2BQ765I0 119 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 DNAAF1Q8NEP3 725 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 GCDHQ92947 438 aaPredicted RBP11.5□□□□□ -0.57
CLIP3-205ENST00000592017 CEP19Q96LK0 163 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 C1orf147Q96MC9 270 aaPredicted RBP11.5□□□□□ -0.57
CLIP3-205ENST00000592017 OPALINQ96PE5 141 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 SPACA5Q96QH8 159 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 DCTN5Q9BTE1 182 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 VCX3BQ9H321 246 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 CNOT2Q9NZN8 540 aaKnown RBP11.5□□□□□ -0.57
CLIP3-205ENST00000592017 PSORS1C1Q9UIG5 152 aa11.5□□□□□ -0.57
CLIP3-205ENST00000592017 A0A1W2PQ09 198 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 SLC1A7O00341 560 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 MYL12BO14950 172 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 SPRY1O43609 319 aaPredicted RBP11.49□□□□□ -0.57
CLIP3-205ENST00000592017 CYB5AP00167 134 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 HCKP08631 526 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 CFPP27918 469 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 CCDC58Q4VC31 144 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 GPR157Q5UAW9 335 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 RBMS3Q6XE24 437 aaKnown RBP11.49□□□□□ -0.57
CLIP3-205ENST00000592017 BRD3OSQ6XYD6 125 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 CD177Q8N6Q3 437 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 ZFP41Q8N8Y5 198 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms