RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ADAT3Q96EY9 351 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-227ENST00000591849 CEP19Q96LK0 163 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 GAFA1Q96PS6 74 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 PDCD1LG2Q9BQ51 273 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 JAM3Q9BX67 310 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 PKIBQ9C010 78 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 ZCCHC4Q9H5U6 513 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 SMURF1Q9HCE7 757 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 BABAM2Q9NXR7 383 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 SCN3BQ9NY72 215 aa8.36□□□□□ -1.07
BRCA1-227ENST00000591849 WNK2Q9Y3S1 2297 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 A0A1B0GW55 424 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 PTGES3LE9PB15 166 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 H0YJX3 145 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 MYL12BO14950 172 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 SIGLEC5O15389 551 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 XPNPEP2O43895 674 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 ZFPL1O95159 310 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 TFF1P04155 84 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 CD2P06729 351 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DUX4L2P0CJ85 424 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DUX4L3P0CJ86 424 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DUX4L4P0CJ87 422 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DUX4L5P0CJ88 424 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DUX4L6P0CJ89 424 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DUX4L7P0CJ90 424 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 PGA5P0DJD9 388 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 AZGP1P25311 298 aaKnown RBP8.35□□□□□ -1.07
BRCA1-227ENST00000591849 SOX2P48431 317 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 GTF2A1P52655 376 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-227ENST00000591849 SRSF2Q01130 221 aaKnown RBP8.35□□□□□ -1.07
BRCA1-227ENST00000591849 PAX2Q02962 417 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 IL24Q13007 206 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-227ENST00000591849 ZNF788Q6ZQV5 615 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DNAAF1Q8NEP3 725 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 OR51A4Q8NGJ6 313 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 OR10AC1Q8NH08 325 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 GPR148Q8TDV2 347 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 TFAP2CQ92754 450 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 ZDHHC16Q969W1 377 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 RNF166Q96A37 237 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-227ENST00000591849 SPSB1Q96BD6 273 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 UPRTQ96BW1 309 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 WDFY2Q96P53 400 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 OPALINQ96PE5 141 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 GPER1Q99527 375 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 SLC6A7Q99884 636 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 NRIP2Q9BQI9 281 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 CNOT2Q9NZN8 540 aaKnown RBP8.35□□□□□ -1.07
BRCA1-227ENST00000591849 DUX4Q9UBX2 424 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 GLS2Q9UI32 602 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 RPUSD1Q9UJJ7 312 aaKnown RBP8.35□□□□□ -1.07
BRCA1-227ENST00000591849 ERGIC3Q9Y282 383 aa8.35□□□□□ -1.07
BRCA1-227ENST00000591849 IGKV1D-17A0A075B6S4 117 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 TRAV40A0A0B4J280 105 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 A0A1W2PPH5 198 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 TRIM77I1YAP6 450 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 NOS1APO75052 506 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-227ENST00000591849 KNG1P01042 644 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 PIPP12273 146 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-227ENST00000591849 AMY2BP19961 511 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 RAB3AP20336 220 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 HSPA13P48723 471 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 AQP4P55087 323 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 PPP3R1P63098 170 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 CDK5R1Q15078 307 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 PDCD1Q15116 288 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 DGUOKQ16854 277 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 SATL1Q86VE3 508 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 CALHM1Q8IU99 346 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 Q8IYB0 196 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 FAM185AQ8N0U4 392 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 FGFRL1Q8N441 504 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 ZNF561Q8N587 486 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 ASCC1Q8N9N2 400 aaKnown RBP8.34□□□□□ -1.07
BRCA1-227ENST00000591849 ZSCAN4Q8NAM6 433 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-227ENST00000591849 ZNRF1Q8ND25 227 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 OR52N1Q8NH53 320 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 NRG4Q8WWG1 115 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 EMG1Q92979 244 aaKnown RBP8.34□□□□□ -1.07
BRCA1-227ENST00000591849 MYDGFQ969H8 173 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 RFT1Q96AA3 541 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 CPNE2Q96FN4 548 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-227ENST00000591849 ZNF649Q9BS31 505 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 PLCXD1Q9NUJ7 323 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 ZNF69Q9UC07 566 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 CLEC2DQ9UHP7 191 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 ZNF281Q9Y2X9 895 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 PCDHGB5Q9Y5G0 923 aa8.34□□□□□ -1.07
BRCA1-227ENST00000591849 ANK3Q12955 4377 aaKnown RBP8.33□□□□□ -1.08
BRCA1-227ENST00000591849 CUBNO60494 3623 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 ARHGAP32A7KAX9 2087 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 IGKV1-9A0A0C4DH69 117 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 SPRY1O43609 319 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-227ENST00000591849 SULT1B1O43704 296 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 SFTPBP07988 381 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 CHRM2P08172 466 aa8.33□□□□□ -1.08
BRCA1-227ENST00000591849 IGHV4-38-2P0DP08 117 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms