RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 YBX1P67809 324 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-214ENST00000589677 ARL16Q0P5N6 197 aa13.04□□□□□ -0.32
SMARCA4-214ENST00000589677 EDDM3AQ14507 147 aa13.04□□□□□ -0.32
SMARCA4-214ENST00000589677 BTNL3Q6UXE8 466 aa13.04□□□□□ -0.32
SMARCA4-214ENST00000589677 SLC37A2Q8TED4 501 aa13.04□□□□□ -0.32
SMARCA4-214ENST00000589677 CLDN23Q96B33 292 aa13.04□□□□□ -0.32
SMARCA4-214ENST00000589677 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 DHHO43323 396 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 HLA-GP17693 338 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 FGF8P55075 233 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 DEFB103AP81534 67 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ZNF77Q15935 545 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ISXQ2M1V0 245 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 TRIM61Q5EBN2 209 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 LIAT1Q6ZQX7 453 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 OR10G8Q8NGN5 311 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 PHOSPHO2Q8TCD6 241 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 TBX15Q96SF7 602 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ST6GALNAC2Q9UJ37 374 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ZNF600Q6ZNG1 722 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 TLNRD1Q9H1K6 362 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 KIAA1456Q9P272 454 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 TUBGCP6Q96RT7 1819 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 KIAA1551Q9HCM1 1747 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 PLRG1O43660 514 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 OR5G3P0C626 314 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 SPCS3P61009 180 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 EDARADDQ8WWZ3 215 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 TMEM147Q9BVK8 224 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 A0A1W2PNR3 127 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 SSC5DA1L4H1 1573 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 PPM1DO15297 605 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ZNF253O75346 499 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ARR3P36575 388 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ERHP84090 104 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ZNF738Q8NE65 137 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 RHOVQ96L33 236 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 PECRQ9BY49 303 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 IL21Q9HBE4 155 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 ZNF391Q9UJN7 358 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 SLC45A2Q9UMX9 530 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 HDGFL3Q9Y3E1 203 aa13.03□□□□□ -0.32
SMARCA4-214ENST00000589677 SOX15O60248 233 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 DHRS3O75911 302 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 ZBTB25P24278 435 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 POLR2GP62487 172 aaKnown RBP eCLIP13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 FAM53BQ14153 422 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 NAT6Q93015 286 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 OR4C45A6NMZ5 311 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 SIAH2O43255 324 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 CYC1P08574 325 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 PTX4Q96A99 478 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 TREM2Q9NZC2 230 aa13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 RCC2Q9P258 522 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-214ENST00000589677 FER1L6Q2WGJ9 1857 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 OR3A4PP47883 348 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 EXT1Q16394 746 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 CNEP1R1Q8N9A8 125 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 ADPRHL1Q8NDY3 354 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 ZBP1Q9H171 429 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 SLC25A22Q9H936 323 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 VSIG4Q9Y279 399 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 PHIPQ8WWQ0 1821 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 EWSR1Q01844 656 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■□□□ 14.1
SMARCA4-214ENST00000589677 OR8G1Q15617 311 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 RTL8BQ17RB0 113 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 LAIR2Q6ISS4 152 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 C6orf201Q7Z4U5 140 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 TSEN54Q7Z6J9 526 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 FAAP24Q9BTP7 215 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 KCNK15Q9H427 330 aa13.02□□□□□ -0.33
SMARCA4-214ENST00000589677 M0R2Z0 102 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 GYPAP02724 150 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 ZFP36L2P47974 494 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 RPL24P83731 157 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 PAX5Q02548 391 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 NHLH1Q02575 133 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 ADAD2Q8NCV1 583 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 MVB12AQ96EY5 273 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 S1PR3Q99500 378 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 OBP2AQ9NY56 170 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 TRBV23-1A0A0A0MS06 115 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 A0A1B0GV90 55 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 NPIPB9F8W1W9 429 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 COX7A2P2O60397 106 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 TMEM97Q5BJF2 176 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 VWA1Q6PCB0 445 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 NPEPL1Q8NDH3 523 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 OIT3Q8WWZ8 545 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 MSL2Q9HCI7 577 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 ANXA10Q9UJ72 324 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 PAM16Q9Y3D7 125 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 A6NCN8 305 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 CDS2O95674 445 aa13.01□□□□□ -0.33
SMARCA4-214ENST00000589677 CYB5R3P00387 301 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms