RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 MNDAP41218 407 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 PTH2RP49190 550 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 VEGFCP49767 419 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 ZNF81P51508 661 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 SCCPDHQ8NBX0 429 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 OR56B1Q8NGI3 324 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 FAM222BQ8WU58 562 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 GTF3AQ92664 365 aaKnown RBP18.92■□□□□ 0.62
ATG4D-209ENST00000588857 MRPS24Q96EL2 167 aaKnown RBP18.92■□□□□ 0.62
ATG4D-209ENST00000588857 ELMOD3Q96FG2 381 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 POLDIP2Q9Y2S7 368 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 NBPF19A0A087WUL8 3843 aa18.92■□□□□ 0.62
ATG4D-209ENST00000588857 SYNGR1O43759 233 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 PLAUP00749 431 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 HLA-DQB1P01920 261 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 COL8A1P27658 744 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 APOBEC3AP31941 199 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-209ENST00000588857 ZNF154Q13106 437 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 OSR2Q8N2R0 312 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 CHST4Q8NCG5 386 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 AQP3Q92482 292 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 NEUROG1Q92886 237 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 NICN1Q9BSH3 213 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 ZDHHC8Q9ULC8 765 aa18.91■□□□□ 0.62
ATG4D-209ENST00000588857 CHD3Q12873 2000 aaKnown RBP18.9■□□□□ 0.62
ATG4D-209ENST00000588857 IGHV3-64DA0A0J9YX35 117 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 C19orf84I3L1E1 186 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 RAB27BO00194 218 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 SPRY3O43610 288 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 SFTPBP07988 381 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 BCL3P20749 454 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 CPT2P23786 658 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 MAB21L1Q13394 359 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 BAK1Q16611 211 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 MOGAT2Q3SYC2 334 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 OR10R2Q8NGX6 335 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 HS3ST6Q96QI5 342 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 NUDT16L1Q9BRJ7 211 aaKnown RBP18.9■□□□□ 0.62
ATG4D-209ENST00000588857 CISD1Q9NZ45 108 aaKnown RBP18.9■□□□□ 0.62
ATG4D-209ENST00000588857 MTCH1Q9NZJ7 389 aa18.9■□□□□ 0.62
ATG4D-209ENST00000588857 CDIPTO14735 213 aa18.89■□□□□ 0.62
ATG4D-209ENST00000588857 CTDSPLO15194 276 aa18.89■□□□□ 0.62
ATG4D-209ENST00000588857 IL7P13232 177 aa18.89■□□□□ 0.62
ATG4D-209ENST00000588857 TNFSF4P23510 183 aa18.89■□□□□ 0.62
ATG4D-209ENST00000588857 NPBWR2P48146 333 aa18.89■□□□□ 0.62
ATG4D-209ENST00000588857 FBXL14Q8N1E6 418 aa18.89■□□□□ 0.62
ATG4D-209ENST00000588857 TMEM204Q9BSN7 226 aa18.89■□□□□ 0.62
ATG4D-209ENST00000588857 TM2D1Q9BX74 207 aa18.89■□□□□ 0.62
ATG4D-209ENST00000588857 A6NLC8 198 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 RHBDL1O75783 438 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 CSF3P09919 207 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 LOXP28300 417 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-209ENST00000588857 CD200P41217 278 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 MRPS10P82664 201 aaKnown RBP18.89■□□□□ 0.61
ATG4D-209ENST00000588857 IFITM3Q01628 133 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 ZNF672Q499Z4 452 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-209ENST00000588857 TRIQKQ629K1 86 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 ELP2Q6IA86 826 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 FAM89BQ8N5H3 189 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 Q96M66 194 aa18.89■□□□□ 0.61
ATG4D-209ENST00000588857 KLF2Q9Y5W3 355 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-209ENST00000588857 A0A0A6YYD4 124 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 IGFBP2P18065 325 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 SRP9P49458 86 aaKnown RBP18.88■□□□□ 0.61
ATG4D-209ENST00000588857 PRAMEF6Q5VXH4 476 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 STEAP3Q658P3 488 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 BATF2Q8N1L9 274 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 Q8NFD4 153 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 FCAMRQ8WWV6 532 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 RAB3CQ96E17 227 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 DIRC2Q96SL1 478 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 DHRS9Q9BPW9 319 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 THAP7Q9BT49 309 aaPredicted RBP18.88■□□□□ 0.61
ATG4D-209ENST00000588857 RHOFQ9HBH0 211 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 RBFOX1Q9NWB1 397 aaKnown RBP18.88■□□□□ 0.61
ATG4D-209ENST00000588857 ST3GAL6Q9Y274 331 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 ABCA4P78363 2273 aa18.88■□□□□ 0.61
ATG4D-209ENST00000588857 M0R233 179 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 SOCS1O15524 211 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 AKR7A2O43488 359 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 GSTZ1O43708 216 aaPredicted RBP18.87■□□□□ 0.61
ATG4D-209ENST00000588857 GABRR1P24046 479 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 INPP1P49441 399 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 FGF12P61328 243 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 SCN1BQ07699 218 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 RNASE12Q5GAN4 147 aaKnown RBP18.87■□□□□ 0.61
ATG4D-209ENST00000588857 LYSMD2Q8IV50 215 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 Q8IYB0 196 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 CELF2-AS1Q8N7Q2 184 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 LILRB1Q8NHL6 650 aaPredicted RBP18.87■□□□□ 0.61
ATG4D-209ENST00000588857 SMIM4Q8WVI0 70 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 OR2V2Q96R30 315 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 TLNRD1Q9H1K6 362 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 AUNIPQ9H7T9 357 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 UFSP2Q9NUQ7 469 aa18.87■□□□□ 0.61
ATG4D-209ENST00000588857 PKDREJQ9NTG1 2253 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 GABARAPH6UMI1 98 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 IGHV1-46P01743 117 aa18.86■□□□□ 0.61
ATG4D-209ENST00000588857 BLVRBP30043 206 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-209ENST00000588857 PRSS3P35030 304 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms