RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 OR4M1Q8NGD0 313 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 OR4K5Q8NGD3 323 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 TMEM56Q96MV1 263 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 PITX2Q99697 317 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 SLC17A9Q9BYT1 436 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 SDHAF3Q9NRP4 125 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 CCL15-CCL14A0A0B4J2E2 113 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 C5orf63A6NC05 138 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 TMX2-CTNND1H3BSU7 103 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 ATP6V1G2O95670 118 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 APCSP02743 223 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 PSMB9P28065 219 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 PRSS3P35030 304 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 RPL14P50914 215 aaKnown RBP5.11□□□□□ -1.59
VMP1-208ENST00000588617 STC1P52823 247 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 BLVRAP53004 296 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 ESRRGP62508 458 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 RPL10AP62906 217 aaKnown RBP5.11□□□□□ -1.59
VMP1-208ENST00000588617 BAXQ07812 192 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 DMC1Q14565 340 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 CCL15Q16663 113 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 FBXL19-AS1Q494R0 122 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 RIMKLAQ8IXN7 391 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 FAM210AQ96ND0 272 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 APOL4Q9BPW4 351 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 TAPBPLQ9BX59 468 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 SPZ1Q9BXG8 430 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 DHX35Q9H5Z1 703 aaKnown RBP5.11□□□□□ -1.59
VMP1-208ENST00000588617 ZNF222Q9UK12 451 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 POLR3AO14802 1390 aaPredicted RBP5.11□□□□□ -1.59
VMP1-208ENST00000588617 ADCY9O60503 1353 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 TMEM131Q92545 1883 aa5.11□□□□□ -1.59
VMP1-208ENST00000588617 OR5H1A6NKK0 313 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 OR2AT4A6NND4 320 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 SOCS1O15524 211 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 WIZO95785 1651 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 CDK1P06493 297 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 OR56A5P0C7T3 313 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 ZNF688P0C7X2 276 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 HLA-DMAP28067 261 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 TSPOP30536 169 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 NCAPD3P42695 1498 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 GRB2P62993 217 aaKnown RBP5.1□□□□□ -1.59
VMP1-208ENST00000588617 HMGXB3Q12766 1538 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 ITGB3BPQ13352 177 aaPredicted RBP5.1□□□□□ -1.59
VMP1-208ENST00000588617 SLC25A35Q3KQZ1 300 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 PGAM4Q8N0Y7 254 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 DDIT4LQ96D03 193 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 BIRC8Q96P09 236 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 MRPL20Q9BYC9 149 aaKnown RBP5.1□□□□□ -1.59
VMP1-208ENST00000588617 POTEKPQ9BYX7 375 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 TPK1Q9H3S4 243 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 RBM22Q9NW64 420 aaKnown RBP eCLIP5.1□□□□□ -1.598e-63■■■■■ 27.1
VMP1-208ENST00000588617 LRRC42Q9Y546 428 aa5.1□□□□□ -1.59
VMP1-208ENST00000588617 FTCDNL1E5RQL4 147 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 PANO1I0J062 215 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 ATP8B1O43520 1251 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 SPAG7O75391 227 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 FOXH1O75593 365 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 IGLV2-8P01709 118 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 IGHV3-11P01762 117 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 ZNF823P16415 610 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 IL3RAP26951 378 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 ACOT2P49753 483 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 SLC18A1P54219 525 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 PPP1CAP62136 330 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 MADCAM1Q13477 382 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 MED21Q13503 144 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 SAXO2Q658L1 398 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 MED27Q6P2C8 311 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 GUSBP11Q6P575 273 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 TPGS1Q6ZTW0 290 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 ZNF565Q8N9K5 539 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 OR1L1Q8NH94 360 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 RNF138Q8WVD3 245 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 HGDQ93099 445 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 S100PBPQ96BU1 408 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 ZNF414Q96IQ9 312 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 OR10C1Q96KK4 312 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 CDX2Q99626 313 aaPredicted RBP5.09□□□□□ -1.59
VMP1-208ENST00000588617 NUDT9Q9BW91 350 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 MFSD1Q9H3U5 465 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 PLEKHJ1Q9NW61 149 aa5.09□□□□□ -1.59
VMP1-208ENST00000588617 H0YJW9 148 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 BPY2O14599 106 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 FGF16O43320 207 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 GATBO75879 557 aaKnown RBP5.08□□□□□ -1.6
VMP1-208ENST00000588617 CCL23P55773 120 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 DLX6P56179 175 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 LOXL1Q08397 574 aaPredicted RBP5.08□□□□□ -1.6
VMP1-208ENST00000588617 KHDRBS2Q5VWX1 349 aaKnown RBP5.08□□□□□ -1.6
VMP1-208ENST00000588617 NTM-AS1Q6ZSK4 140 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 TMEM256Q8N2U0 113 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 FMC1Q96HJ9 113 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 SPACA5Q96QH8 159 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 API5Q9BZZ5 524 aaKnown RBP5.08□□□□□ -1.6
VMP1-208ENST00000588617 NSRP1Q9H0G5 558 aaKnown RBP5.08□□□□□ -1.6
VMP1-208ENST00000588617 ZNF331Q9NQX6 463 aaPredicted RBP5.08□□□□□ -1.6
VMP1-208ENST00000588617 C8orf17Q9NRJ1 99 aa5.08□□□□□ -1.6
VMP1-208ENST00000588617 NUP153P49790 1475 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms