RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 HPNP05981 417 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 GCH1P30793 250 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 ARR3P36575 388 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 ZNF133P52736 654 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 PLAC9Q5JTB6 97 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 PDZD9Q8IXQ8 264 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 CEP295Q9C0D2 2601 aa10.83□□□□□ -0.67
SMARCA4-208ENST00000585799 TRAV17A0A0B4J275 112 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 NUPL2O15504 423 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 PHF1O43189 567 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 TIMM8AO60220 97 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 NTF4P34130 210 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 OR13C8Q8NGS7 320 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 OPN4Q9UHM6 478 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 HEATR1Q9H583 2144 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 MYO15AQ9UKN7 3530 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 C9orf170A2RU37 121 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 TK1P04183 234 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 CEBPGP53567 150 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 H2BFSP57053 126 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 SSBP1Q04837 148 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 ZBTB37Q5TC79 503 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 SLC30A7Q8NEW0 376 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 OR1J1Q8NGS3 322 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 ASF1BQ9NVP2 202 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 A0A0U1RQV5 110 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 TSPAN4O14817 238 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 TNFSF12O43508 249 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 CYTIPO60759 359 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 APOC3P02656 99 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 TMEM50BP56557 158 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 RNPS1Q15287 305 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 SYT3Q9BQG1 590 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 ESRP2Q9H6T0 727 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 AK3Q9UIJ7 227 aa10.83□□□□□ -0.68
SMARCA4-208ENST00000585799 CD300LBA8K4G0 201 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 TMEM14DPA8MWL7 114 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 HSD17B6O14756 317 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 CFDP00746 253 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 CAV2P51636 162 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 ARHGDIBP52566 201 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 VAMP2P63027 116 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 EXTL1Q92935 676 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 SARAFQ96BY9 339 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 GSX2Q9BZM3 304 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 WDR13Q9H1Z4 485 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 ZNF71Q9NQZ8 489 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 GHRLQ9UBU3 117 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 SERPINE3A8MV23 424 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 ONECUT2O95948 504 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 LAMTOR1Q6IAA8 161 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 MDP1Q86V88 176 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 PARP12Q9H0J9 701 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 TREM1Q9NP99 234 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 TRAPPC2LQ9UL33 140 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 SCO1O75880 301 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 OMGP23515 440 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 PIGPP57054 158 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 B3GALT5-AS1P59052 145 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 CYCSP99999 105 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 PLEKHN1Q494U1 663 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 PAN3Q58A45 887 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 RPS4Y2Q8TD47 263 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 AQP3Q92482 292 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 NABP1Q96AH0 204 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 NECAP2Q9NVZ3 263 aa10.82□□□□□ -0.68
SMARCA4-208ENST00000585799 A0A1W2PNU3 283 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 OR6C65A6NJZ3 312 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 ALX3O95076 343 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 NPBWR2P48146 333 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 FOXO1Q12778 655 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 ZNF695Q8IW36 515 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 CCDC28AQ8IWP9 274 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 CPEB3Q8NE35 698 aaKnown RBP10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 OR51H1Q8NH63 302 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 PLPPR2Q96GM1 343 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 PNRC2Q9NPJ4 139 aaKnown RBP10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 LHX2P50458 406 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 PNLIPRP3Q17RR3 467 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 TMEM128Q5BJH2 165 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 PEAR1Q5VY43 1037 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 FBXW12Q6X9E4 464 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 CDH26Q8IXH8 852 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 SPICQ8N5J4 248 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 GPHA2Q96T91 129 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 ZNF552Q9H707 407 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 DEGS1O15121 323 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 CXCL2P19875 107 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 BCL3P20749 454 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 FUT3P21217 361 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 AKR1C2P52895 323 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 FAM3AP98173 230 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 AKR1C1Q04828 323 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 ZNF528Q3MIS6 628 aa10.81□□□□□ -0.68
SMARCA4-208ENST00000585799 ARRDC1Q8N5I2 433 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms