RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SNAPC1Q16533 368 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 Q6ZSR3 168 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 KLHDC1Q8N7A1 406 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 BBS1Q8NFJ9 593 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 MALSU1Q96EH3 234 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 MNTQ99583 582 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 NRIP2Q9BQI9 281 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 GABARAPL1Q9H0R8 117 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 MOB1AQ9H8S9 216 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 HES4Q9HCC6 221 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.17□□□□□ -0.465e-9■□□□□ 10.1
VAPA-209ENST00000585042 SIGLEC9Q9Y336 463 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 TBL2Q9Y4P3 447 aaKnown RBP12.17□□□□□ -0.46
VAPA-209ENST00000585042 ORC6Q9Y5N6 252 aa12.17□□□□□ -0.46
VAPA-209ENST00000585042 PLXNB1O43157 2135 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 PQLC2LA1A4F0 135 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 C17orf98A8MV24 154 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 G3V4G9 280 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 XPNPEP2O43895 674 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 TK1P04183 234 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 FAHP16930 419 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 MPZP25189 248 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 FOXRED1Q96CU9 486 aaPredicted RBP12.16□□□□□ -0.46
VAPA-209ENST00000585042 PITPNC1Q9UKF7 332 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 FOXJ3Q9UPW0 622 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 V9GYS6 101 aa12.16□□□□□ -0.46
VAPA-209ENST00000585042 K7N7A8 449 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 SRSF10O75494 262 aaKnown RBP12.15□□□□□ -0.46
VAPA-209ENST00000585042 NXPH2O95156 264 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 TTRP02766 147 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 DYNLT3P51808 116 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 ERVK11-1P61568 191 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 PTGES3Q15185 160 aaKnown RBP12.15□□□□□ -0.46
VAPA-209ENST00000585042 TMEM236Q5W0B7 351 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 KDM4DQ6B0I6 523 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 ELMOD2Q8IZ81 293 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 OR4S1Q8NGB4 309 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 OR13D1Q8NGV5 346 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 STMN2Q93045 179 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 PKIBQ9C010 78 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 SEBOXQ9HB31 216 aaPredicted RBP12.15□□□□□ -0.46
VAPA-209ENST00000585042 TVP23BQ9NYZ1 205 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 H2AFY2Q9P0M6 372 aaPredicted RBP12.15□□□□□ -0.46
VAPA-209ENST00000585042 OAZ3Q9UMX2 235 aa12.15□□□□□ -0.46
VAPA-209ENST00000585042 CCDC182A6NF36 153 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 SAC3D1A6NKF1 404 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 LOC110117498-PIK3R3F6TDL0 507 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 H3BUI4 141 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 PSMD9O00233 223 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 SYNGR1O43759 233 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 CHST1O43916 411 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 CHRM2P08172 466 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 DLX6P56179 175 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 IL24Q13007 206 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 DMRTC1Q5HYR2 192 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 MEPCEQ7L2J0 689 aaKnown RBP12.14□□□□□ -0.47
VAPA-209ENST00000585042 NDUFA11Q86Y39 141 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 OR11H6Q8NGC7 330 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 OR4M1Q8NGD0 313 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 RPS4Y2Q8TD47 263 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 PRSS22Q9GZN4 317 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 ZNF702PQ9H963 129 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 SERTAD4Q9NUC0 356 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 IKZF2Q9UKS7 526 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 TCF19Q9Y242 345 aa12.14□□□□□ -0.47
VAPA-209ENST00000585042 MEGF11A6BM72 1044 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 CCL3L1P16619 93 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 BMXP51813 675 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 MEF2CQ06413 473 aaPredicted RBP12.13□□□□□ -0.47
VAPA-209ENST00000585042 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
VAPA-209ENST00000585042 ZNF322Q6U7Q0 402 aaPredicted RBP12.13□□□□□ -0.47
VAPA-209ENST00000585042 OR4F17Q8NGA8 305 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 OR14K1Q8NGZ2 314 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 ZNF488Q96MN9 340 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 CNN2Q99439 309 aaKnown RBP12.13□□□□□ -0.47
VAPA-209ENST00000585042 S100A14Q9HCY8 104 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 ABCB10Q9NRK6 738 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 OR52A1Q9UKL2 312 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 COPS3Q9UNS2 423 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 SNX5Q9Y5X3 404 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 R4GMQ9 66 aa12.13□□□□□ -0.47
VAPA-209ENST00000585042 A0A1B0GTI1 187 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 A6NDX4 124 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 ODF3BA8MYP8 253 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 PRR32B1ATL7 298 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 H3BNX3 289 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 MITFO75030 526 aaPredicted RBP12.12□□□□□ -0.47
VAPA-209ENST00000585042 FBXO24O75426 580 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 MRPL3P09001 348 aaKnown RBP12.12□□□□□ -0.47
VAPA-209ENST00000585042 COX7A1P24310 79 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 CXCR4P61073 352 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 EFNB1P98172 346 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 MFGE8Q08431 387 aaPredicted RBP12.12□□□□□ -0.47
VAPA-209ENST00000585042 ZNF273Q14593 569 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 FAM189A2Q15884 450 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 BCL2L15Q5TBC7 163 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 SLX4IPQ5VYV7 408 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms