RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 CALHM1Q8IU99 346 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 Q8IYB0 196 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 FGFRL1Q8N441 504 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 PACRGLQ8N7B6 248 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 Q8N7P7 452 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 TBC1D15Q8TC07 691 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 STMN2Q93045 179 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 PELI1Q96FA3 418 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 FAM234AQ9H0X4 552 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 SMPD3Q9NY59 655 aaPredicted RBP8.14□□□□□ -1.11
SKA2-208ENST00000583927 RPL36Q9Y3U8 105 aaKnown RBP8.14□□□□□ -1.11
SKA2-208ENST00000583927 IGKV1-27A0A075B6S5 117 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 A6NIN4 97 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 RFPL4AA6NLU0 287 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 OR4C45A6NMZ5 311 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 RFPL4AL1F8VTS6 287 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 SLC1A7O00341 560 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 NXPH2O95156 264 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 KNG1P01042 644 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 CFPP27918 469 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 PRDX2P32119 198 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 GABRA2P47869 451 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 RBP2P50120 134 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 UBE2E1P51965 193 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 NANOS3P60323 173 aaKnown RBP8.13□□□□□ -1.11
SKA2-208ENST00000583927 ACSM1Q08AH1 577 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 ALKBH1Q13686 389 aaKnown RBP8.13□□□□□ -1.11
SKA2-208ENST00000583927 ODF4Q2M2E3 257 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 DMRTC1Q5HYR2 192 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 NCR3LG1Q68D85 454 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 C16orf87Q6PH81 154 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 VMO1Q7Z5L0 202 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 ZNRF1Q8ND25 227 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 ZNF555Q8NEP9 628 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 OR5D13Q8NGL4 314 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 APH1BQ8WW43 257 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 SSMEM1Q8WWF3 244 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 TNFRSF14Q92956 283 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 LHX4Q969G2 390 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 SPSB1Q96BD6 273 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 BORCS8Q96FH0 119 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 C4orf36Q96KX1 117 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 ALG8Q9BVK2 526 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 METTL8Q9H825 291 aaKnown RBP8.13□□□□□ -1.11
SKA2-208ENST00000583927 RHOFQ9HBH0 211 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 FGF20Q9NP95 211 aaPredicted RBP8.13□□□□□ -1.11
SKA2-208ENST00000583927 ERVK13-1Q9NX77 482 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 HHLA2Q9UM44 414 aa8.13□□□□□ -1.11
SKA2-208ENST00000583927 IGHV3OR16-10A0A075B7F0 116 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 IGKV1-9A0A0C4DH69 117 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 A0A1W2PPH5 198 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 IRGMA1A4Y4 181 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 TMEM212A6NML5 194 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 J3QLW9 94 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 K7N7A8 449 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 WBP4O75554 376 aaKnown RBP8.12□□□□□ -1.11
SKA2-208ENST00000583927 BAG2O95816 211 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 CCDC159P0C7I6 412 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 ZNF19P17023 458 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 NDUFB7P17568 137 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 PRKACBP22694 351 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 DCKP27707 260 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 ATP1B3P54709 279 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 GMFBP60983 142 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 BLMHQ13867 455 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 CCDC58Q4VC31 144 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 AWAT1Q58HT5 328 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 ZNF691Q5VV52 312 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 TTC23Q5W5X9 447 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 LHFPL2Q6ZUX7 228 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 LHFPL3Q86UP9 236 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 ANGPTL5Q86XS5 388 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 MKXQ8IYA7 352 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 RDH10Q8IZV5 341 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 CD177Q8N6Q3 437 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 OR52I1Q8NGK6 324 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 RPS4Y2Q8TD47 263 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 H1FXQ92522 213 aaKnown RBP8.12□□□□□ -1.11
SKA2-208ENST00000583927 ADAT3Q96EY9 351 aaPredicted RBP8.12□□□□□ -1.11
SKA2-208ENST00000583927 CEP19Q96LK0 163 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 MTCH1Q9NZJ7 389 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 ONECUT1Q9UBC0 465 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 AASSQ9UDR5 926 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 MYRFQ9Y2G1 1151 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 CAB39Q9Y376 341 aaPredicted RBP8.12□□□□□ -1.11
SKA2-208ENST00000583927 MMP24Q9Y5R2 645 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 HSPE1-MOB4S4R3N1 261 aa8.12□□□□□ -1.11
SKA2-208ENST00000583927 TRBV2A0A0J9YWF9 115 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 A0A1B0GUS0 222 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 FAM230AA0A1W2PPH8 454 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 POM121CA8CG34 1229 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 RNASEK-C17orf49H0YIS7 233 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 CASQ2O14958 399 aaPredicted RBP8.11□□□□□ -1.11
SKA2-208ENST00000583927 HOXA3O43365 443 aaPredicted RBP8.11□□□□□ -1.11
SKA2-208ENST00000583927 ZNF737O75373 536 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 RBP4P02753 201 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 TK1P04183 234 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 CHRM2P08172 466 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 MELTFP08582 738 aa8.11□□□□□ -1.11
SKA2-208ENST00000583927 LIMS3P0CW19 117 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms