RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 METTL15A6NJ78 407 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 NOS1APO75052 506 aaPredicted RBP16.7■□□□□ 0.26
SHMT1-209ENST00000582653 NXPH2O95156 264 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 PAHP00439 452 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 CCL1P22362 96 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 ERVFRD-1P60508 538 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 DHRS7BQ6IAN0 325 aaPredicted RBP16.7■□□□□ 0.26
SHMT1-209ENST00000582653 OR4M1Q8NGD0 313 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 NRIP2Q9BQI9 281 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 TCF7L1Q9HCS4 588 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 OR14J1Q9UGF5 321 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 POLDIP2Q9Y2S7 368 aa16.7■□□□□ 0.26
SHMT1-209ENST00000582653 SF3B6Q9Y3B4 125 aaKnown RBP16.7■□□□□ 0.26
SHMT1-209ENST00000582653 VWFP04275 2813 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 ANKRD61A6NGH8 418 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 SLC1A7O00341 560 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 CIB2O75838 187 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 ATP6V1E1P36543 226 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 UBE2V2Q15819 145 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 TMEM200BQ69YZ2 307 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 SLC35E4Q6ICL7 350 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 MKXQ8IYA7 352 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 ZNF561Q8N587 486 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 BEND2Q8NDZ0 799 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 OR5D13Q8NGL4 314 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 OR8J1Q8NGP2 316 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 PYDC1Q8WXC3 89 aa16.69■□□□□ 0.26
SHMT1-209ENST00000582653 DHRS7CA6NNS2 312 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 SYT7O43581 403 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 ANGPTL7O43827 346 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 INMTO95050 263 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 MPZP25189 248 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 PAX6P26367 422 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 ERVK11-1P61568 191 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 RPL31P62899 125 aaKnown RBP16.68■□□□□ 0.26
SHMT1-209ENST00000582653 PRSS35Q8N3Z0 413 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 C11orf42Q8N5U0 333 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 AJUBAQ96IF1 538 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 MEGF9Q9H1U4 602 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 PLEKHA1Q9HB21 404 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 HES4Q9HCC6 221 aa16.68■□□□□ 0.26
SHMT1-209ENST00000582653 IGKV1-27A0A075B6S5 117 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 F8VVB4 439 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 F8VWA3 439 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 SULT1C4O75897 302 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 CCL3L1P16619 93 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 ZNF85Q03923 595 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 TP53I3Q53FA7 332 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 RDH10Q8IZV5 341 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 FAM234AQ9H0X4 552 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 FBLN5Q9UBX5 448 aa16.67■□□□□ 0.26
SHMT1-209ENST00000582653 TK1P04183 234 aa16.66■□□□□ 0.26
SHMT1-209ENST00000582653 IL24Q13007 206 aa16.66■□□□□ 0.26
SHMT1-209ENST00000582653 RNF166Q96A37 237 aaPredicted RBP16.66■□□□□ 0.26
SHMT1-209ENST00000582653 SSX3Q99909 188 aa16.66■□□□□ 0.26
SHMT1-209ENST00000582653 ADI1Q9BV57 179 aa16.66■□□□□ 0.26
SHMT1-209ENST00000582653 PKIBQ9C010 78 aa16.66■□□□□ 0.26
SHMT1-209ENST00000582653 MTCH1Q9NZJ7 389 aa16.66■□□□□ 0.26
SHMT1-209ENST00000582653 GNG8Q9UK08 70 aa16.66■□□□□ 0.26
SHMT1-209ENST00000582653 SLC7A11Q9UPY5 501 aa16.66■□□□□ 0.26
SHMT1-209ENST00000582653 MEX3AA1L020 520 aaKnown RBP16.65■□□□□ 0.26
SHMT1-209ENST00000582653 H3BUX3 64 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 PIPP12273 146 aaPredicted RBP16.65■□□□□ 0.26
SHMT1-209ENST00000582653 KIR3DL2P43630 455 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 CDC42P60953 191 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 COL10A1Q03692 680 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 TMED1Q13445 227 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 ZNF273Q14593 569 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 RFKQ969G6 155 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 SLAMF9Q96A28 289 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 PPA2Q9H2U2 334 aa16.65■□□□□ 0.26
SHMT1-209ENST00000582653 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.65■□□□□ 0.26
SHMT1-209ENST00000582653 A0A1W2PPH5 198 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 ENTPD6O75354 484 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 COX7A1P24310 79 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 FUT6P51993 359 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 ISL1P61371 349 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 LY6EQ16553 131 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 AANATQ16613 207 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 ZIK1Q3SY52 487 aaPredicted RBP16.64■□□□□ 0.25
SHMT1-209ENST00000582653 ASCC1Q8N9N2 400 aaKnown RBP16.64■□□□□ 0.25
SHMT1-209ENST00000582653 CHST5Q9GZS9 411 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 HEXA-AS1Q9H8Q6 139 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 IMPAD1Q9NX62 359 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 AASSQ9UDR5 926 aa16.64■□□□□ 0.25
SHMT1-209ENST00000582653 LOC107986453A0A1B0GWG9 222 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 H3BNX3 289 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 K7N7A8 449 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 EI24O14681 340 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 ALPLP05186 524 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 KIR2DS4P43632 304 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 BMXP51813 675 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 KPNB1Q14974 876 aaKnown RBP16.63■□□□□ 0.25
SHMT1-209ENST00000582653 ZNF782Q6ZMW2 699 aaPredicted RBP16.63■□□□□ 0.25
SHMT1-209ENST00000582653 SLC25A26Q70HW3 274 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 FAM220AQ7Z4H9 259 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 CEP19Q96LK0 163 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 USE1Q9NZ43 259 aa16.63■□□□□ 0.25
SHMT1-209ENST00000582653 WNK1Q9H4A3 2382 aa16.62■□□□□ 0.25
SHMT1-209ENST00000582653 hCG_1809904A0A1W2PP81 198 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms