RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CD82P27701 267 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 GPR1P46091 355 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 CCL23P55773 120 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 MTPNP58546 118 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 RAD51Q06609 339 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 DHRS2Q13268 280 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 ELOCQ15369 112 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 LINC00303Q3SY05 128 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 FBXL19-AS1Q494R0 122 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 ANXA8L1Q5VT79 327 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 ZNF322Q6U7Q0 402 aaPredicted RBP0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 Q6ZQT7 251 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 APRG1Q8IVJ8 170 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 CMTM8Q8IZV2 173 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 SLC7A5P1Q8MH63 180 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 ZNF567Q8N184 647 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 LINC00337Q8N6G1 96 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 Q8NAQ8 132 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 BPIFB6Q8NFQ5 453 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 BAALCQ8WXS3 180 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 ISOC2Q96AB3 205 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 JSRP1Q96MG2 331 aaPredicted RBP0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 THTPAQ9BU02 230 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 CD209Q9NNX6 404 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 DDX19BQ9UMR2 479 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 DYSFO75923 2080 aa0.9□□□□□ -2.26
SMCHD1-206ENST00000581631 A0A1B0GU33 70 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 ISLRO14498 428 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 RGS5O15539 181 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 DHRS3O75911 302 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 SMC2O95347 1197 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 TTC4O95801 387 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 IGKV1D-33P01593 117 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 IGKV1-33P01594 117 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 SNRPAP09012 282 aaKnown RBP0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 PTHLHP12272 177 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 GFAPP14136 432 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 RAB11AP62491 216 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 SLC35A1P78382 337 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 C5orf64Q2M2E5 130 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 TTC19Q6DKK2 380 aaPredicted RBP0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 EPGNQ6UW88 154 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 MSRB3Q8IXL7 192 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 OR10D4PQ8NGN7 298 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 ING5Q8WYH8 240 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 RAD51AP1Q96B01 352 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 OPALINQ96PE5 141 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 MTG1Q9BT17 334 aaPredicted RBP0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 MRPL20Q9BYC9 149 aaKnown RBP0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 DEFB129Q9H1M3 183 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 OR51B5Q9H339 312 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 TXNIPQ9H3M7 391 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 EXO5Q9H790 373 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 ZNF286AQ9HBT8 521 aa0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 MRPL16Q9NX20 251 aaKnown RBP0.9□□□□□ -2.27
SMCHD1-206ENST00000581631 SETD1AO15047 1707 aaKnown RBP0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 TRAV8-4A0A0B4J246 113 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 A0A1W2PRD5 423 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 GMNCA6NCL1 334 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 SLC22A20A6NK97 555 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 A8MWP4 228 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 J3QT63 122 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 K7ERS5 55 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 TRDMT1O14717 391 aaKnown RBP0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 NDUFS5O43920 106 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 P01737 135 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 GABRR2P28476 465 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 PSMB2P49721 201 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 RPL10AP62906 217 aaKnown RBP0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 RPL18AQ02543 176 aaKnown RBP0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 LAMTOR4Q0VGL1 99 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 PMVKQ15126 192 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 HIKESHIQ53FT3 197 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 FAM231DQ6ZW35 169 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 TMEM25Q86YD3 366 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 CNPY4Q8N129 248 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 DAW1Q8N136 415 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 ZFP82Q8N141 532 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 C3orf22Q8N5N4 141 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 INO80EQ8NBZ0 244 aaPredicted RBP0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 ZNF555Q8NEP9 628 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 OR2K2Q8NGT1 345 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 KIAA1143Q96AT1 154 aaPredicted RBP0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 C20orf144Q9BQM9 153 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 GABARAPL1Q9H0R8 117 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 TUBA4BQ9H853 241 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 TTC41PQ6P2S7 1318 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 WDR19Q8NEZ3 1342 aa0.89□□□□□ -2.27
SMCHD1-206ENST00000581631 IGHV3-21A0A0B4J1V1 117 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 LOC100653049A0A140TA62 436 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 LEUTXA8MZ59 168 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 HACD1B0YJ81 288 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 H3BN98 237 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 PSIP1O75475 530 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 KRT34O76011 436 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 OR2A4O95047 310 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 GZMAP12544 262 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 ARL2P36404 184 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 SLC18A1P54219 525 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms