RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TFR2Q9UP52 801 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 SLC7A11Q9UPY5 501 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 MROH5Q6ZUA9 1318 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 M0R1B8 84 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 RNF113AO15541 343 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 NRASP01111 189 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 HRASP01112 189 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 KRASP01116 189 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 DEKP35659 375 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 NUP62P37198 522 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 TGM4P49221 684 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 RPS11P62280 158 aaKnown RBP eCLIP2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 RPL10AP62906 217 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 XIAPP98170 497 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 PRKCDQ05655 676 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 ATP5G2Q06055 141 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 FAM131AQ6UXB0 335 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 PID1Q7Z2X4 250 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 PRNTQ86SH4 94 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 CALHM3Q86XJ0 350 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 CA13Q8N1Q1 262 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 C1orf64Q8NEQ6 169 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 OR6N2Q8NGY6 317 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 SMIM8Q96KF7 97 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 ZNF649Q9BS31 505 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 SHANK2-AS3Q9BTD1 123 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 ANGPTL4Q9BY76 406 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 API5Q9BZZ5 524 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 SLC38A1Q9H2H9 487 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 DDIT4Q9NX09 232 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 STX18Q9P2W9 335 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 HMGXB4Q9UGU5 601 aa2.41□□□□□ -2.02
SMCHD1-205ENST00000581383 ADGRL1O94910 1474 aa2.4□□□□□ -2.02
SMCHD1-205ENST00000581383 GSTTP1A0A1W2PQM5 241 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 OR6C70A6NIJ9 312 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 PRMT5O14744 637 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 PFN1P07737 140 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 P2RY2P41231 377 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 TRDNQ13061 729 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 IGFBP7Q16270 282 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 TMEM69Q5SWH9 247 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 SYT6Q5T7P8 510 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 CLEC19AQ6UXS0 136 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 NELFCDQ8IXH7 590 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 CYP4Z2PQ8N1L4 340 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 ATPAF2Q8N5M1 289 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 CCNYL1Q8N7R7 359 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 LINC00304Q8N9R0 145 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 ADTRPQ96IZ2 230 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 SPACA5Q96QH8 159 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 VCX3AQ9NNX9 186 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 AP3M1Q9Y2T2 418 aa2.4□□□□□ -2.03
SMCHD1-205ENST00000581383 SLC5A10A0PJK1 596 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 IZUMO1RA6ND01 250 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 VGLL3A8MV65 326 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 ENSAO43768 121 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 IGHV1-46P01743 117 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 HLA-DMAP28067 261 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 FLI1Q01543 452 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 TOMM34Q15785 309 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 KCTD16Q68DU8 428 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 FAM231DQ6ZW35 169 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 LINC00337Q8N6G1 96 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 ZDHHC22Q8N966 263 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 ITLN2Q8WWU7 325 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF75CPQ92670 426 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 RBPMSQ93062 196 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 CIDECQ96AQ7 238 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 OR2M4Q96R27 311 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 SYT4Q9H2B2 425 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 ABCB9Q9NP78 766 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 C12orf4Q9NQ89 552 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 RBM22Q9NW64 420 aaKnown RBP eCLIP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 SDHAF2Q9NX18 166 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 STMN3Q9NZ72 180 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 KLF13Q9Y2Y9 288 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 SLC22A7Q9Y694 548 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 MROH2BQ7Z745 1585 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 BAZ1BQ9UIG0 1483 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 SMARCA4P51532 1647 aa2.39□□□□□ -2.03
SMCHD1-205ENST00000581383 DYSFO75923 2080 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 ADAMTSL3P82987 1691 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 SC5DO75845 299 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 CXorf1O96002 111 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 OR5AC1P0C628 307 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 CCDC172P0C7W6 258 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 GPR4P46093 362 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 TUFMP49411 452 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 OR12D2P58182 307 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 MEF2CQ06413 473 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 FAM104BQ5XKR9 115 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 APOBEC3HQ6NTF7 200 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 TRMT10CQ7L0Y3 403 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 SYS1Q8N2H4 156 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 OR4D6Q8NGJ1 314 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 OR6K2Q8NGY2 324 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 THOC2Q8NI27 1593 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 C22orf15Q8WYQ4 148 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 HINT2Q9BX68 163 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms