RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 NRG4Q8WWG1 115 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 GGHQ92820 318 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 RFT1Q96AA3 541 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 OPALINQ96PE5 141 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 ZNF649Q9BS31 505 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 JAM3Q9BX67 310 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 CUBNO60494 3623 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 IGKV1-27A0A075B6S5 117 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 RFPL4AA6NLU0 287 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 ZNF879B4DU55 563 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 RFPL4AL1F8VTS6 287 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 SLC1A7O00341 560 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 MYL12BO14950 172 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 SIGLEC5O15389 551 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 LIPFP07098 398 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 HCKP08631 526 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 IGHV4-38-2P0DP08 117 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 AMY2BP19961 511 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 SOX2P48431 317 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 TGM4P49221 684 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 ARF6P62330 175 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 IL24Q13007 206 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 DGUOKQ16854 277 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 LHFPL2Q6ZUX7 228 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 EGFL6Q8IUX8 553 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 ZNRF1Q8ND25 227 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 GATAD2BQ8WXI9 593 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 UPRTQ96BW1 309 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 CEP19Q96LK0 163 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 ELL3Q9HB65 397 aaPredicted RBP16.14■□□□□ 0.17
SS18-209ENST00000578595 ZNF69Q9UC07 566 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 CLEC2DQ9UHP7 191 aa16.14■□□□□ 0.17
SS18-209ENST00000578595 RPUSD1Q9UJJ7 312 aaKnown RBP16.14■□□□□ 0.17
SS18-209ENST00000578595 IGKV1D-17A0A075B6S4 117 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 FCN3O75636 299 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 FSHBP01225 129 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 SFTPBP07988 381 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 RPSAP08865 295 aaKnown RBP16.13■□□□□ 0.17
SS18-209ENST00000578595 ACAA1P09110 424 aaPredicted RBP16.13■□□□□ 0.17
SS18-209ENST00000578595 PPIAL4GP0DN37 164 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 MPZP25189 248 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 CDK5R1Q15078 307 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 KLF17Q5JT82 389 aaPredicted RBP16.13■□□□□ 0.17
SS18-209ENST00000578595 ATPAF1Q5TC12 328 aaPredicted RBP16.13■□□□□ 0.17
SS18-209ENST00000578595 GPR157Q5UAW9 335 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 XAF1Q6GPH4 301 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 RPL22L1Q6P5R6 122 aaKnown RBP16.13■□□□□ 0.17
SS18-209ENST00000578595 UTS2BQ765I0 119 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 TFAP2CQ92754 450 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 EMG1Q92979 244 aaKnown RBP16.13■□□□□ 0.17
SS18-209ENST00000578595 DACT3Q96B18 629 aaPredicted RBP16.13■□□□□ 0.17
SS18-209ENST00000578595 SPSB1Q96BD6 273 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 SPACA5Q96QH8 159 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 JMJD8Q96S16 334 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 NRIP2Q9BQI9 281 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 ZCCHC4Q9H5U6 513 aa16.13■□□□□ 0.17
SS18-209ENST00000578595 DSCAML1Q8TD84 2053 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 IGKV1-9A0A0C4DH69 117 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 GPR37O15354 613 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 SPRY1O43609 319 aaPredicted RBP16.12■□□□□ 0.17
SS18-209ENST00000578595 CD2P06729 351 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 SNU13P55769 128 aaKnown RBP16.12■□□□□ 0.17
SS18-209ENST00000578595 KRTAP24-1Q3LI83 254 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 FIP1L1Q6UN15 594 aaKnown RBP16.12■□□□□ 0.17
SS18-209ENST00000578595 MKXQ8IYA7 352 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 CMTM4Q8IZR5 234 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 FAM185AQ8N0U4 392 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 ZFP41Q8N8Y5 198 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 ASCC1Q8N9N2 400 aaKnown RBP16.12■□□□□ 0.17
SS18-209ENST00000578595 DNAAF1Q8NEP3 725 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 OR5D18Q8NGL1 313 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 WDFY2Q96P53 400 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 CNTD2Q9H8S5 307 aa16.12■□□□□ 0.17
SS18-209ENST00000578595 CNOT2Q9NZN8 540 aaKnown RBP16.12■□□□□ 0.17
SS18-209ENST00000578595 PNMA8CA0A1B0GUJ8 204 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 NOS1APO75052 506 aaPredicted RBP16.11■□□□□ 0.17
SS18-209ENST00000578595 PIPP12273 146 aaPredicted RBP16.11■□□□□ 0.17
SS18-209ENST00000578595 PRDX2P32119 198 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 CCDC58Q4VC31 144 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 IZUMO2Q6UXV1 221 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 BRD3OSQ6XYD6 125 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 SERPINA12Q8IW75 414 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 SIGLECL1Q8N7X8 197 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 OR5D14Q8NGL3 314 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 OR52N1Q8NH53 320 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 GPR148Q8TDV2 347 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 DCTN5Q9BTE1 182 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 BABAM2Q9NXR7 383 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 MTCH1Q9NZJ7 389 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 PSORS1C1Q9UIG5 152 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 ZNF222Q9UK12 451 aa16.11■□□□□ 0.17
SS18-209ENST00000578595 A0A0A6YYJ9 748 aa16.1■□□□□ 0.17
SS18-209ENST00000578595 MAGEB3O15480 346 aa16.1■□□□□ 0.17
SS18-209ENST00000578595 SULT1B1O43704 296 aa16.1■□□□□ 0.17
SS18-209ENST00000578595 VENTXO95231 258 aa16.1■□□□□ 0.17
SS18-209ENST00000578595 C11orf91Q3C1V1 193 aa16.1■□□□□ 0.17
SS18-209ENST00000578595 PHC2Q8IXK0 858 aa16.1■□□□□ 0.17
SS18-209ENST00000578595 PDZD9Q8IXQ8 264 aa16.1■□□□□ 0.17
SS18-209ENST00000578595 BCL6BQ8N143 479 aaPredicted RBP16.1■□□□□ 0.17
SS18-209ENST00000578595 ZNF561Q8N587 486 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms