RNA–Protein interactions for RNA: ENST00000578476.5

EIF4A1-208, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-208	ENST00000578476	C12orf43	Q96C57	262 aa	Known RBP	13.91	□□□□□ -0.18
EIF4A1-208	ENST00000578476	NKX3-1	Q99801	234 aa	Predicted RBP	13.91	□□□□□ -0.18
EIF4A1-208	ENST00000578476	MRPS26	Q9BYN8	205 aa	Known RBP	13.91	□□□□□ -0.18
EIF4A1-208	ENST00000578476	ZNF665	Q9H7R5	613 aa		13.91	□□□□□ -0.18
EIF4A1-208	ENST00000578476	SNTG1	Q9NSN8	517 aa		13.91	□□□□□ -0.18
EIF4A1-208	ENST00000578476	NLK	Q9UBE8	527 aa		13.91	□□□□□ -0.18
EIF4A1-208	ENST00000578476	STUB1	Q9UNE7	303 aa		13.91	□□□□□ -0.18
EIF4A1-208	ENST00000578476	IGKV1-12	A0A0C4DH73	117 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	TRAPPC2L	H3BP13	241 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	NDUFA2	O43678	99 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	IGKV1D-12	P01611	117 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	GYPA	P02724	150 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	INHBB	P09529	407 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	FOSL1	P15407	271 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	CD36	P16671	472 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	CALR	P27797	417 aa	Known RBP	13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	TMEM249	Q2WGJ8	235 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	SMIM21	Q3B7S5	101 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	ACP7	Q6ZNF0	438 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	LRRTM1	Q86UE6	522 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	CDH26	Q8IXH8	852 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	SAXO1	Q8IYX7	474 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	JAGN1	Q8N5M9	183 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	NKAIN3	Q8N8D7	197 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	PNLDC1	Q8NA58	520 aa	Known RBP	13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	OR5T2	Q8NGG2	359 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	TNFAIP8L1	Q8WVP5	186 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	RAB39B	Q96DA2	213 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	FAM192A	Q9GZU8	254 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	PATZ1	Q9HBE1	687 aa	Known RBP	13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	HES4	Q9HCC6	221 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	SMURF1	Q9HCE7	757 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	EXOSC4	Q9NPD3	245 aa	Known RBP	13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	MIOX	Q9UGB7	285 aa		13.9	□□□□□ -0.18
EIF4A1-208	ENST00000578476	ITPR3	Q14573	2671 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	OR2AT4	A6NND4	320 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476		F8VVB4	439 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476		F8VWA3	439 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	TNFRSF13B	O14836	293 aa	Predicted RBP	13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	WNT2	P09544	360 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	RPS2	P15880	293 aa	Known RBP	13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	ADRA2C	P18825	462 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	BCL3	P20749	454 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	PTGFR	P43088	359 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	OR3A4P	P47883	348 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	NPBWR2	P48146	333 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	C22orf42	Q6IC83	251 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	LYPD2	Q6UXB3	125 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476		Q8IYB0	196 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	PXT1	Q8NFP0	134 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	OR51E2	Q9H255	320 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	SSR3	Q9UNL2	185 aa		13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476	MAP1A	P78559	2803 aa	Predicted RBP	13.89	□□□□□ -0.19
EIF4A1-208	ENST00000578476		F5H0A9	414 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	ADAM20	O43506	726 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	KDM4B	O94953	1096 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	PSG2	P11465	335 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	CPT2	P23786	658 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	GADD45A	P24522	165 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	FGF9	P31371	208 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	GLT8D1	Q68CQ7	371 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	STUM	Q69YW2	141 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	NLRC3	Q7RTR2	1065 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	C1QL2	Q7Z5L3	287 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	ANGPTL6	Q8NI99	470 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	EMG1	Q92979	244 aa	Known RBP	13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	YIPF6	Q96EC8	236 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	NEIL1	Q96FI4	390 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	CCL13	Q99616	98 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	CNTD2	Q9H8S5	307 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	ELL3	Q9HB65	397 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	RBFOX1	Q9NWB1	397 aa	Known RBP	13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	TXNL4B	Q9NX01	149 aa	Known RBP	13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	ING4	Q9UNL4	249 aa		13.88	□□□□□ -0.19
EIF4A1-208	ENST00000578476	MAST4	O15021	2626 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	FAM157A	C9JC47	383 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	SFTPB	P07988	381 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	IGHV4-31	P0DP07	118 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	CALCB	P10092	127 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	MYL9	P24844	172 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	GABRA2	P47869	451 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	GZMK	P49863	264 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	RSU1	Q15404	277 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	CYB5R2	Q6BCY4	276 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	ASCL4	Q6XD76	172 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	LYPD6	Q86Y78	171 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	FAM58A	Q8N1B3	248 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	OR8B3	Q8NGG8	313 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	C1orf159	Q96HA4	380 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	OR8B2	Q96RD0	313 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	S100A13	Q99584	98 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	CHCHD6	Q9BRQ6	235 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	UQCC2	Q9BRT2	126 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	RHOF	Q9HBH0	211 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	KAAG1	Q9UBP8	84 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	GSTK1	Q9Y2Q3	226 aa		13.87	□□□□□ -0.19
EIF4A1-208	ENST00000578476	AK6	Q9Y3D8	172 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms