RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TMEM128Q5BJH2 165 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 C6orf201Q7Z4U5 140 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 BPIFCQ8NFQ6 507 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 OR14L1PQ8NHC6 308 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 ASB13Q8WXK3 278 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 NAT6Q93015 286 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 MRGPRFQ96AM1 343 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 NAA11Q9BSU3 229 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 TMEM231Q9H6L2 316 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 SLC2A8Q9NY64 477 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 TMEM265A0A087WTH1 108 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 IGKV1-9A0A0C4DH69 117 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 MPTX1A8MV57 137 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 A8MXK9 166 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 PATE3B3GLJ2 98 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 E9PLN8 166 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 AGPAT2O15120 278 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 IGHV3-9P01782 118 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 TPT1P13693 172 aaKnown RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 TBPP20226 339 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 MALP21145 153 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 SSR4P51571 173 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 FXYD4P59646 89 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 CYCSP99999 105 aaKnown RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 PHYHD1Q5SRE7 291 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 CLEC18BQ6UXF7 455 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 HOGA1Q86XE5 327 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 LYPD6Q86Y78 171 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 C20orf196Q8IYI0 205 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 ARRDC1Q8N5I2 433 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 OR14K1Q8NGZ2 314 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 SPTSSAQ969W0 71 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 MRPS24Q96EL2 167 aaKnown RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 CPNE2Q96FN4 548 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 RBM14Q96PK6 669 aaKnown RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 HDHD3Q9BSH5 251 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 C1orf43Q9BWL3 253 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 SMIM3Q9BZL3 60 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 MYOZ1Q9NP98 299 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 ZNF850A8MQ14 1090 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 ATP6V1G2-DDX39BF2Z307 99 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 SPRY1O43609 319 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 MTRF1O75570 445 aaKnown RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 SLC25A4P12235 298 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 PPIAP62937 165 aaKnown RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 ECH1Q13011 328 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 ZNF169Q14929 603 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 RSU1Q15404 277 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 PLEKHN1Q494U1 663 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 ACTBL2Q562R1 376 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 AKR7LQ8NHP1 331 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 MARC2Q969Z3 335 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 WBP1Q96G27 269 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 ALKBH3Q96Q83 286 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 HRH4Q9H3N8 390 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 NELFAQ9H3P2 528 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 C5orf66Q9H5L9 145 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 FN3KRPQ9HA64 309 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 FLVCR1Q9Y5Y0 555 aa4.67□□□□□ -1.66
VAPA-203ENST00000577539 CHCHD2Q9Y6H1 151 aaPredicted RBP4.67□□□□□ -1.66
VAPA-203ENST00000577539 ZNF705EA8MWA4 302 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 EIF1BO60739 113 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 SFT2D2O95562 160 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ZNF17P17021 662 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 CCNOP22674 350 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 CPT2P23786 658 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 CALCRP30988 508 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 P2RY4P51582 365 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 TAS2R46P59540 309 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 RPS18P62269 152 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 RAB32Q13637 225 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 PCOLCEQ15113 449 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 UBE2V2Q15819 145 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 SLC25A53Q5H9E4 307 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 C9orf135Q5VTT2 229 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 BAP18Q8IXM2 172 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 MAML2Q8IZL2 1156 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 BHLHE23Q8NDY6 225 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 OR9K2Q8NGE7 335 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 OR13G1Q8NGZ3 307 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 OR51F2Q8NH61 342 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 SAP25Q8TEE9 199 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ZNF2Q9BSG1 426 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 SHARPINQ9H0F6 387 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 MED9Q9NWA0 146 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 GLS2Q9UI32 602 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 GPR132Q9UNW8 380 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 LSM5Q9Y4Y9 91 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 A0A0J9YW62 118 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 MSGN1A6NI15 193 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 F8W036 122 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ZNHIT1O43257 154 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 SGCEO43556 437 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 CXCL13O43927 109 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 DHRS3O75911 302 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 OPN1MWP04001 364 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 P04436 131 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 HPNP05981 417 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 GP1BAP07359 652 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 OPN1MW2P0DN77 364 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 325.7 ms