RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 TMEM246Q9BRR3 403 aa12.17□□□□□ -0.46
NPLOC4-218ENST00000574964 WDR13Q9H1Z4 485 aa12.17□□□□□ -0.46
NPLOC4-218ENST00000574964 OR51E2Q9H255 320 aa12.17□□□□□ -0.46
NPLOC4-218ENST00000574964 PPIL3Q9H2H8 161 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-218ENST00000574964 SMURF1Q9HCE7 757 aa12.17□□□□□ -0.46
NPLOC4-218ENST00000574964 RASL12Q9NYN1 266 aa12.17□□□□□ -0.46
NPLOC4-218ENST00000574964 ING4Q9UNL4 249 aa12.17□□□□□ -0.46
NPLOC4-218ENST00000574964 PDCD5O14737 125 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 NDUFA2O43678 99 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 NOS1APO75052 506 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 GYPAP02724 150 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 ACAA1P09110 424 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 RPS2P15880 293 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 GABRA2P47869 451 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 RSU1Q15404 277 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 CD200R1LQ6Q8B3 271 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 FIP1L1Q6UN15 594 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 ACP7Q6ZNF0 438 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 CDH26Q8IXH8 852 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 Q8IYB0 196 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 SAXO1Q8IYX7 474 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 ZSCAN4Q8NAM6 433 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 OR5T2Q8NGG2 359 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 EMG1Q92979 244 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 FOXRED1Q96CU9 486 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 NKX3-1Q99801 234 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 NRIP2Q9BQI9 281 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 TXNL4BQ9NX01 149 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 MTCH1Q9NZJ7 389 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 NLKQ9UBE8 527 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 MIOXQ9UGB7 285 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 SCOCQ9UIL1 159 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 MALRD1Q5VYJ5 2156 aa12.16□□□□□ -0.46
NPLOC4-218ENST00000574964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 NKX6-3A6NJ46 265 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 CEACAM18A8MTB9 384 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 ADAM20O43506 726 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 FSTL3O95633 263 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 CD99P14209 185 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 BCL3P20749 454 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 FGF9P31371 208 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 PTGFRP43088 359 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 OR3A4PP47883 348 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 PSMD7P51665 324 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 ZP1P60852 638 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 TEX36Q5VZQ5 186 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 DCDC5Q6ZRR9 648 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 NLRC3Q7RTR2 1065 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 GPR141Q7Z602 305 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 LRRTM1Q86UE6 522 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 FAM90A1Q86YD7 464 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 CIARTQ8N365 385 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 PXT1Q8NFP0 134 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 C12orf43Q96C57 262 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 YIPF6Q96EC8 236 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 SEH1LQ96EE3 360 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 C18orf12Q96KH6 178 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 KCTD7Q96MP8 289 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 METTL9Q9H1A3 318 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 ZNF665Q9H7R5 613 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 PATZ1Q9HBE1 687 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 OR14J1Q9UGF5 321 aa12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 AK6Q9Y3D8 172 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-218ENST00000574964 TEX15Q9BXT5 2789 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 ACANP16112 2415 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 TRAV1-2A0A0B4J238 106 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 OR2AT4A6NND4 320 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 AIREO43918 545 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 HTR3BO95264 441 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 CSTBP04080 98 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 PRKACAP17612 351 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 ADRA2CP18825 462 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 NPBWR2P48146 333 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 SNU13P55769 128 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 AWAT2Q6E213 333 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 GDPGP1Q6ZNW5 385 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 SLC36A1Q7Z2H8 476 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 FAM58AQ8N1B3 248 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 OR8B3Q8NGG8 313 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 NEIL1Q96FI4 390 aaPredicted RBP12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 COX4I2Q96KJ9 171 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 OR8B2Q96RD0 313 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 UQCC2Q9BRT2 126 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 CNTD2Q9H8S5 307 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 PLGRKTQ9HBL7 147 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 PCDHB16Q9NRJ7 776 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 GLS2Q9UI32 602 aa12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 MRPS28Q9Y2Q9 187 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 FLNAP21333 2647 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-218ENST00000574964 CSMD1Q96PZ7 3565 aa12.13□□□□□ -0.47
NPLOC4-218ENST00000574964 A0A096LNT2 108 aa12.13□□□□□ -0.47
NPLOC4-218ENST00000574964 IGKV1-12A0A0C4DH73 117 aa12.13□□□□□ -0.47
NPLOC4-218ENST00000574964 RFPL4AA6NLU0 287 aa12.13□□□□□ -0.47
NPLOC4-218ENST00000574964 RFPL4AL1F8VTS6 287 aa12.13□□□□□ -0.47
NPLOC4-218ENST00000574964 TMPRSS2O15393 492 aa12.13□□□□□ -0.47
NPLOC4-218ENST00000574964 ZNF780AO75290 641 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-218ENST00000574964 KDM4BO94953 1096 aa12.13□□□□□ -0.47
NPLOC4-218ENST00000574964 CDRT1O95170 752 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms