RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, human

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPV1-208	ENST00000574085	URM1	Q9BTM9	101 aa	Known RBP	11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	TMEM106C	Q9BVX2	250 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	OR10A2	Q9H208	303 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	RFNG	Q9Y644	331 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	HPN	P05981	417 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	LINC00271	P0C7V0	271 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	IL11	P20809	199 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	DMRTC1	Q5HYR2	192 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	DNM1P34	Q6PK57	102 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	ZNF429	Q86V71	674 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	FRZB	Q92765	325 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	SMDT1	Q9H4I9	107 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	ZNF701	Q9NV72	531 aa	Predicted RBP	11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	CHD9	Q3L8U1	2897 aa		11.18	□□□□□ -0.62
TRPV1-208	ENST00000574085	IGKV1D-8	A0A087WSZ0	117 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	CRYM-AS1	A6NIL9	109 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	CDRT15L2	A8MXV6	281 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	C17orf105	B2RV13	164 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	SRP19	P09132	144 aa	Known RBP	11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	GIMD1	P0DJR0	217 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	RND3	P61587	244 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	SP6	Q3SY56	376 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	C4orf17	Q53FE4	359 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	AKR1C8P	Q5T2L2	129 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	M1AP	Q8TC57	530 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	ABHD5	Q8WTS1	349 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	C5orf34	Q96MH7	638 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	ABHD14A	Q9BUJ0	271 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	RANBP2	P49792	3224 aa	Known RBP	11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	SMCO3	A2RU48	225 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085		A6NNC1	897 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	HSBP1L1	C9JCN9	74 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	PLRG1	O43660	514 aa	Known RBP	11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	GPR157	Q5UAW9	335 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	SPRED2	Q7Z698	418 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	OR5D18	Q8NGL1	313 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	OR13D1	Q8NGV5	346 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	SLC25A31	Q9H0C2	315 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	LIPG	Q9Y5X9	500 aa		11.17	□□□□□ -0.62
TRPV1-208	ENST00000574085	NSG1	A0A0A6YYJ2	146 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	TP53I11	O14683	189 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	RPLP1	P05386	114 aa	Known RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	CTSD	P07339	412 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	ZNF776	Q68DI1	518 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	TIPARP	Q7Z3E1	657 aa	Known RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	CYB561D1	Q8N8Q1	229 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	ZFP62	Q8NB50	900 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085		Q8NFD4	153 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	TVP23C	Q96ET8	276 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	SHD	Q96IW2	340 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	ZNF700	Q9H0M5	742 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	CDC14C	A4D256	554 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	NPIPA5	E9PKD4	350 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	ATXN7	O15265	892 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	NPIPB7	O75200	414 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	CA11	O75493	328 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	NXPH2	O95156	264 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	AHSA1	O95433	338 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	FOSL2	P15408	326 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	BLVRB	P30043	206 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	GALNS	P34059	522 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	GJA4	P35212	333 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	GLIPR1	P48060	266 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	NFATC4	Q14934	902 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	SPSB3	Q6PJ21	355 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	OOSP2	Q86WS3	158 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	OR10S1	Q8NGN2	331 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	OR2G3	Q8NGZ4	309 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	RNASE8	Q8TDE3	154 aa	Known RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	ASB10	Q8WXI3	467 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	C11orf40	Q8WZ69	217 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	REEP6	Q96HR9	211 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	HIST1H2BL	Q99880	126 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	PECR	Q9BY49	303 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	NPIPA1	Q9UND3	350 aa		11.16	□□□□□ -0.62
TRPV1-208	ENST00000574085	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085		M0QZK8	103 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	OR5H8	P0DN80	308 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	PGC	P20142	388 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	CDKN1B	P46527	198 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	POLR2H	P52434	150 aa	Known RBP	11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	LYZL2	Q7Z4W2	148 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	SNIP1	Q8TAD8	396 aa	Known RBP	11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	NIPSNAP3B	Q9BS92	247 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	OR8D2	Q9GZM6	311 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	PNO1	Q9NRX1	252 aa	Known RBP	11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	PADI1	Q9ULC6	663 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085		A0A1W2PPQ1	181 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085		A6NIZ1	184 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	DHRS7C	A6NNS2	312 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	IL18BP	O95998	194 aa		11.15	□□□□□ -0.62
TRPV1-208	ENST00000574085	PIGP	P57054	158 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms