RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 DIRAS3O95661 229 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 OR5AC1P0C628 307 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 ZNF728P0DKX0 622 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 SNCAP37840 140 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 AFF3P51826 1226 aaKnown RBP13.64□□□□□ -0.23
NUP88-207ENST00000573584 HGFACQ04756 655 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 RTN4IP1Q8WWV3 396 aaPredicted RBP13.64□□□□□ -0.23
NUP88-207ENST00000573584 SPTSSAQ969W0 71 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 HIST1H2BAQ96A08 127 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 ZNF581Q9P0T4 197 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 NXT1Q9UKK6 140 aaKnown RBP13.64□□□□□ -0.23
NUP88-207ENST00000573584 RARRES3Q9UL19 164 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 MTCH2Q9Y6C9 303 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 FAM230AA0A1W2PPH8 454 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 NPIPA2E9PIF3 369 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 NPIPA3F8WFD2 350 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 BCAT2O15382 392 aaPredicted RBP13.63□□□□□ -0.23
NUP88-207ENST00000573584 SNRNP70P08621 437 aaKnown RBP13.63□□□□□ -0.23
NUP88-207ENST00000573584 HOXB1P14653 301 aaPredicted RBP13.63□□□□□ -0.23
NUP88-207ENST00000573584 Q6ZSR3 168 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 EIF5A2Q9GZV4 153 aaKnown RBP13.63□□□□□ -0.23
NUP88-207ENST00000573584 ARV1Q9H2C2 271 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 RGCCQ9H4X1 137 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 NAA60Q9H7X0 242 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 BORCS7-ASMTA0A0B4J1R7 106 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 TP53I11O14683 189 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 DKK1O94907 266 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 DANCRP0C864 163 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 GLI4P10075 376 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 FXYD4P59646 89 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 HIST1H3AP68431 136 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 TMEM187Q14656 261 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 GUK1Q16774 197 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 HIST2H3PS2Q5TEC6 136 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 TSPO2Q5TGU0 170 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 HIST2H3AQ71DI3 136 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 LYZL2Q7Z4W2 148 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 UCN2Q96RP3 112 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 XRCC2O43543 280 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 S100A6P06703 90 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 ACAA1P09110 424 aaPredicted RBP13.63□□□□□ -0.23
NUP88-207ENST00000573584 SEC11BP0C7V7 166 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 ACKR3P25106 362 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 FHITP49789 147 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 SHBQ15464 509 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 AWAT1Q58HT5 328 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 OR2AE1Q8NHA4 323 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 NAA11Q9BSU3 229 aaPredicted RBP13.63□□□□□ -0.23
NUP88-207ENST00000573584 WFDC1Q9HC57 220 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 LUZP4Q9P127 313 aa13.63□□□□□ -0.23
NUP88-207ENST00000573584 C19orf25Q9UFG5 118 aaPredicted RBP13.63□□□□□ -0.23
NUP88-207ENST00000573584 CD63P08962 238 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 ZNF44P15621 663 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 CAMLGP49069 296 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 PHLDA2Q53GA4 152 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 FOXL2NBQ6ZUU3 175 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 COMMD1Q8N668 190 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 CCDC54Q8NEL0 328 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 FBXO17Q96EF6 278 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 HSF4Q9ULV5 492 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 C7orf77A4D0Y5 90 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 M0R036 132 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 MT-ND4LP03901 98 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 EIF2S3LQ2VIR3 472 aaKnown RBP13.62□□□□□ -0.23
NUP88-207ENST00000573584 BRICD5Q6PL45 260 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 C20orf196Q8IYI0 205 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 SPSB1Q96BD6 273 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 ZNF837Q96EG3 531 aaPredicted RBP13.62□□□□□ -0.23
NUP88-207ENST00000573584 GALNT14Q96FL9 552 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 GNRHR2Q96P88 292 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 IP6K3Q96PC2 410 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 AKIRIN1Q9H9L7 192 aaPredicted RBP13.62□□□□□ -0.23
NUP88-207ENST00000573584 SPACA1Q9HBV2 294 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 CNTRLQ7Z7A1 2325 aa13.62□□□□□ -0.23
NUP88-207ENST00000573584 MASP2O00187 686 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 GPR137BO60478 399 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 PRH1P02810 166 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 CBR1P16152 277 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 DTYMKP23919 212 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 RNF212Q495C1 297 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 RAET1LQ5VY80 246 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 ZNF385CQ66K41 422 aaPredicted RBP13.61□□□□□ -0.23
NUP88-207ENST00000573584 TMEM123Q8N131 208 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 DYRK2Q92630 601 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 C20orf24Q9BUV8 137 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 ULBP2Q9BZM5 246 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 C5orf52A6NGY3 159 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 EIF1BO60739 113 aaKnown RBP13.61□□□□□ -0.23
NUP88-207ENST00000573584 VAMP5O95183 116 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 P2RY1P47900 373 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 PRSS12P56730 875 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 GPR157Q5UAW9 335 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 ZNF561Q8N587 486 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 TMEM156Q8N614 296 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 LILRB1Q8NHL6 650 aaPredicted RBP13.61□□□□□ -0.23
NUP88-207ENST00000573584 ISOC2Q96AB3 205 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 REEP6Q96HR9 211 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 GINS3Q9BRX5 216 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 SCRT1Q9BWW7 348 aa13.61□□□□□ -0.23
NUP88-207ENST00000573584 ADAMTS20P59510 1910 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms