RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 A0A1W2PQL4 384 aaPredicted RBP6.13□□□□□ -1.43
NUP88-205ENST00000572809 DNAJC9-AS1A6NH13 148 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 METTL15A6NJ78 407 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 OR5B21A6NL26 309 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 H3BNX3 289 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 EBAG9O00559 213 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DLGAP1O14490 977 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 PEX14O75381 377 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 RHBDL1O75783 438 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 RPP14O95059 124 aaKnown RBP6.13□□□□□ -1.43
NUP88-205ENST00000572809 ALPLP05186 524 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 ACAA1P09110 424 aaPredicted RBP6.13□□□□□ -1.43
NUP88-205ENST00000572809 DUX4L2P0CJ85 424 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DUX4L3P0CJ86 424 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DUX4L4P0CJ87 422 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DUX4L5P0CJ88 424 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DUX4L6P0CJ89 424 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DUX4L7P0CJ90 424 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 HKR1P10072 659 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 MMP9P14780 707 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 GABRA2P47869 451 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 KPNB1Q14974 876 aaKnown RBP6.13□□□□□ -1.43
NUP88-205ENST00000572809 SLC9A3R2Q15599 337 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DEFB112Q30KQ8 113 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 ZIK1Q3SY52 487 aaPredicted RBP6.13□□□□□ -1.43
NUP88-205ENST00000572809 CLVS2Q5SYC1 327 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 ZNF684Q5T5D7 378 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 PLCXD3Q63HM9 321 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 STUMQ69YW2 141 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 ZFP1Q6P2D0 407 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DUX4L9Q6RFH8 374 aaPredicted RBP6.13□□□□□ -1.43
NUP88-205ENST00000572809 ZNF788Q6ZQV5 615 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 PLEKHG7Q6ZR37 379 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 SSX6Q7RTT6 188 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 LYSMD2Q8IV50 215 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 FGFRL1Q8N441 504 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 FAM216BQ8N7L0 139 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 LY6G5BQ8NDX9 201 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 ANGPTL6Q8NI99 470 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 AQP3Q92482 292 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 SLC25A28Q96A46 364 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 TMIGD2Q96BF3 282 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 C1orf147Q96MC9 270 aaPredicted RBP6.13□□□□□ -1.43
NUP88-205ENST00000572809 ADI1Q9BV57 179 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 SIRPDQ9H106 197 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 PRDM13Q9H4Q3 707 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 MOB1AQ9H8S9 216 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 ZMAT3Q9HA38 289 aaKnown RBP6.13□□□□□ -1.43
NUP88-205ENST00000572809 RASL12Q9NYN1 266 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 NLKQ9UBE8 527 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 DUX4Q9UBX2 424 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 SLC22A13Q9Y226 551 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 KPTNQ9Y664 436 aa6.13□□□□□ -1.43
NUP88-205ENST00000572809 A6NIN4 97 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 OR2AT4A6NND4 320 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 CLDN34H7C241 214 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 EI24O14681 340 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 HOXA3O43365 443 aaPredicted RBP6.12□□□□□ -1.43
NUP88-205ENST00000572809 SULT1C4O75897 302 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 PSG2P11465 335 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 HAAOP46952 286 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 ALDH3A2P51648 485 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 IL13RA1P78552 427 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 FOXL1Q12952 345 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 ODF4Q2M2E3 257 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 CDONQ4KMG0 1287 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 AWAT1Q58HT5 328 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 SLC25A30Q5SVS4 291 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 MEDAGQ5VYS4 303 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 RUSC1-AS1Q66K80 236 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 TMEM42Q69YG0 159 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 C16orf87Q6PH81 154 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 HAGHLQ6PII5 290 aaPredicted RBP6.12□□□□□ -1.43
NUP88-205ENST00000572809 Q6YL49 198 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 Q6ZSR3 168 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 CATSPERDQ86XM0 798 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 ZNF573Q86YE8 665 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 CMTM4Q8IZR5 234 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 OR10H4Q8NGA5 316 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 H1FXQ92522 213 aaKnown RBP6.12□□□□□ -1.43
NUP88-205ENST00000572809 RORBQ92753 470 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 LHX4Q969G2 390 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 GAFA1Q96PS6 74 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 DCTN5Q9BTE1 182 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 NOX4Q9NPH5 578 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 GPR173Q9NS66 373 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 ACOXLQ9NUZ1 547 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 IMPAD1Q9NX62 359 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 USE1Q9NZ43 259 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 ONECUT1Q9UBC0 465 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 SLC25A10Q9UBX3 287 aaPredicted RBP6.12□□□□□ -1.43
NUP88-205ENST00000572809 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.12□□□□□ -1.43
NUP88-205ENST00000572809 DNHD1Q96M86 4753 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 FBN3Q75N90 2809 aa6.12□□□□□ -1.43
NUP88-205ENST00000572809 IGKV1D-17A0A075B6S4 117 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 IGHV1-69DA0A0B4J2H0 117 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 A0A1B0GVI7 797 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 MDFIC2A0A1B0GVS7 189 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 NKX6-3A6NJ46 265 aa6.11□□□□□ -1.43
NUP88-205ENST00000572809 SNTNA6NMZ2 147 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms