RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ZNF121P58317 390 aaPredicted RBP13.52□□□□□ -0.25
SMG6-207ENST00000570756 SPCS3P61009 180 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 RND3P61587 244 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 LSM6P62312 80 aaKnown RBP13.52□□□□□ -0.25
SMG6-207ENST00000570756 NHLH2Q02577 135 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 TMEM187Q14656 261 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 KISS1Q15726 138 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 PDZD11Q5EBL8 140 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 TMEM196Q5HYL7 178 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 SLC35E3Q7Z769 313 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 TM2D1Q9BX74 207 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 CHST11Q9NPF2 352 aa13.52□□□□□ -0.25
SMG6-207ENST00000570756 DHRS7CA6NNS2 312 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 DDAH2O95865 285 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 HSPB1P04792 205 aaKnown RBP13.51□□□□□ -0.25
SMG6-207ENST00000570756 OR5AC1P0C628 307 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 OR5H8P0DN80 308 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 NDUFB7P17568 137 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 SFTPDP35247 375 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 AKR1C8PQ5T2L2 129 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 GFI1BQ5VTD9 330 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 PCNX3Q9H6A9 2034 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 SMCO3A2RU48 225 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 B4DEV8 164 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 H0YL77 283 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 ZNF17P17021 662 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 ZNF133P52736 654 aaPredicted RBP13.51□□□□□ -0.25
SMG6-207ENST00000570756 BIDP55957 195 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 THEM4Q5T1C6 240 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 Q6ZSR6 202 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 WDFY1Q8IWB7 410 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 SLC38A9Q8NBW4 561 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 OR5D18Q8NGL1 313 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 OR14L1PQ8NHC6 308 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 RTN4IP1Q8WWV3 396 aaPredicted RBP13.51□□□□□ -0.25
SMG6-207ENST00000570756 PACRGQ96M98 296 aaPredicted RBP13.51□□□□□ -0.25
SMG6-207ENST00000570756 GAS2L1Q99501 681 aaPredicted RBP13.51□□□□□ -0.25
SMG6-207ENST00000570756 SOX7Q9BT81 388 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 TGIF2Q9GZN2 237 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 ZNF700Q9H0M5 742 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 LANCL2Q9NS86 450 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 AK3Q9UIJ7 227 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 ANXA10Q9UJ72 324 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 ATXN7L1Q9ULK2 861 aaPredicted RBP13.51□□□□□ -0.25
SMG6-207ENST00000570756 LHFPL6Q9Y693 200 aa13.51□□□□□ -0.25
SMG6-207ENST00000570756 IGKV1D-8A0A087WSZ0 117 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 IGKV1-9A0A0C4DH69 117 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 LINC01565O15544 149 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 HSPA12AO43301 675 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 ZNF728P0DKX0 622 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 ZNF43P17038 809 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 KLK2P20151 261 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 AKT2P31751 481 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 SP6Q3SY56 376 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 LIAT1Q6ZQX7 453 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 LYZL2Q7Z4W2 148 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 DMRTC2Q8IXT2 367 aaPredicted RBP13.5□□□□□ -0.25
SMG6-207ENST00000570756 C1orf87Q8N0U7 546 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 LGI3Q8N145 548 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 CCDC54Q8NEL0 328 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 OR10AD1Q8NGE0 317 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 OR14K1Q8NGZ2 314 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 FGF14Q92915 247 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 GABRG3Q99928 467 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 PRO1933Q9H354 126 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 PLEKHJ1Q9NW61 149 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 HS3ST3B1Q9Y662 390 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 WSB1Q9Y6I7 421 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 LRP4O75096 1905 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 MKRN2OSH3BPM6 223 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 TRGC1P0CF51 173 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 TMEM225BP0DP42 221 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 HOXB2P14652 356 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 GABREP78334 506 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 CCL20P78556 96 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 EWSR1Q01844 656 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMG6-207ENST00000570756 HAGHQ16775 308 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 SPSB3Q6PJ21 355 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 C9orf40Q8IXQ3 194 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 TOMM40LQ969M1 308 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 C18orf12Q96KH6 178 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 IER2Q9BTL4 223 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 NECAP2Q9NVZ3 263 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 MCTS1Q9ULC4 181 aaKnown RBP13.5□□□□□ -0.25
SMG6-207ENST00000570756 RCL1Q9Y2P8 373 aaKnown RBP13.5□□□□□ -0.25
SMG6-207ENST00000570756 LIPGQ9Y5X9 500 aa13.5□□□□□ -0.25
SMG6-207ENST00000570756 PAX1P15863 534 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 OR1D4P47884 311 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 FOXO1Q12778 655 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 OGFOD3Q6PK18 319 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 SLC16A14Q7RTX9 510 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 ZFP62Q8NB50 900 aaPredicted RBP13.49□□□□□ -0.25
SMG6-207ENST00000570756 ST8SIA1Q92185 356 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 TSLPQ969D9 159 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 RBMXL1Q96E39 390 aaKnown RBP13.49□□□□□ -0.25
SMG6-207ENST00000570756 BOD1Q96IK1 185 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 FAM210BQ96KR6 192 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 EMC6Q9BV81 110 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 KLHL13Q9P2N7 655 aa13.49□□□□□ -0.25
SMG6-207ENST00000570756 CA14Q9ULX7 337 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms