RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 AMZ2Q86W34 360 aa9.58□□□□□ -0.88
CLK3-226ENST00000569406 CYB561A3Q8NBI2 242 aa9.58□□□□□ -0.88
CLK3-226ENST00000569406 OR52L1Q8NGH7 329 aa9.58□□□□□ -0.88
CLK3-226ENST00000569406 ANKRD9Q96BM1 317 aaPredicted RBP9.58□□□□□ -0.88
CLK3-226ENST00000569406 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
CLK3-226ENST00000569406 C19orf53Q9UNZ5 99 aaPredicted RBP9.58□□□□□ -0.88
CLK3-226ENST00000569406 A0A1W2PRS3 328 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 GAGE12BA1L429 117 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 FXYD6P3P58550 94 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 SLC35A1P78382 337 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 PSG6Q00889 435 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 SRSF4Q08170 494 aaKnown RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 ZNF440Q8IYI8 595 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 NOXO1Q8NFA2 376 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 UBE2E3Q969T4 207 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 ZNF586Q9NXT0 402 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 WSB2Q9NYS7 404 aaPredicted RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 SIGLEC7Q9Y286 467 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 K7EQS6 105 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 KIR2DL1P43626 348 aaPredicted RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 HERV-K104P63124 156 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 CYB561D1Q8N8Q1 229 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 OR51A7Q8NH64 312 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 SUN3Q8TAQ9 357 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 ADAMTS15Q8TE58 950 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 RHBDD1Q8TEB9 315 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 A4GALTQ9NPC4 353 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 LYRM2Q9NU23 88 aaPredicted RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 HIF1ANQ9NWT6 349 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 TBL2Q9Y4P3 447 aaKnown RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 EIF1AYO14602 144 aaKnown RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 NTN1O95631 604 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 GYPBP06028 91 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 CEACAM5P06731 702 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 GNRHRP30968 328 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 PBX2P40425 430 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 WASP42768 502 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 PPICP45877 212 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 EIF1AXP47813 144 aaKnown RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 KHKP50053 298 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 TAS2R43P59537 309 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 CKS1BP61024 79 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 ZIC1Q15915 447 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 TMEM41BQ5BJD5 291 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 ALG10BQ5I7T1 473 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 TMPRSS12Q86WS5 348 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 OR2T33Q8NG76 320 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 OR10S1Q8NGN2 331 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 GPR146Q96CH1 333 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 ZNF764Q96H86 408 aaPredicted RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 POM121L2Q96KW2 1035 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 MAGT1Q9H0U3 335 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 ABI3Q9P2A4 366 aa9.57□□□□□ -0.88
CLK3-226ENST00000569406 RCL1Q9Y2P8 373 aaKnown RBP9.57□□□□□ -0.88
CLK3-226ENST00000569406 SCN3AQ9NY46 2000 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 A0A1B0GW15 77 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 EML2O95834 649 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 LIPFP07098 398 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 FOXL2P58012 376 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 ERVS71-1P61550 626 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 LTBQ06643 244 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 RAB31Q13636 194 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 IL22RA1Q8N6P7 574 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 OR4S2Q8NH73 311 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 MIB2Q96AX9 1013 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 RAB11FIP5Q9BXF6 653 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 ANGPTL4Q9BY76 406 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 PELI2Q9HAT8 420 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 CDH20Q9HBT6 801 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 WFDC1Q9HC57 220 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 PRR13Q9NZ81 148 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 PILRBQ9UKJ0 227 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 SCN2AQ99250 2005 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 TRBV2A0A0J9YWF9 115 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 A0A1B0GUS0 222 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 HSD17B6O14756 317 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 ERI3O43414 337 aaKnown RBP9.56□□□□□ -0.88
CLK3-226ENST00000569406 FAHP16930 419 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 CYCSP99999 105 aaKnown RBP9.56□□□□□ -0.88
CLK3-226ENST00000569406 OR8I2Q8N0Y5 310 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 FGF14Q92915 247 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 FBXL17Q9UF56 701 aa9.56□□□□□ -0.88
CLK3-226ENST00000569406 C9orf172C9J069 976 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 GDF9O60383 454 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 ZIC2O95409 532 aaPredicted RBP9.55□□□□□ -0.88
CLK3-226ENST00000569406 NDUFV2P19404 249 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 GSTM3P21266 225 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 BCL6P41182 706 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 IL24Q13007 206 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 RAB32Q13637 225 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 RNF44Q7L0R7 432 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 TSTD1Q8NFU3 115 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 GRHL3Q8TE85 626 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 ACY3Q96HD9 319 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 ZMAT3Q9HA38 289 aaKnown RBP9.55□□□□□ -0.88
CLK3-226ENST00000569406 OBP2AQ9NY56 170 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 LRP12Q9Y561 859 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 LINC01565O15544 149 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 MSR1P21757 451 aa9.55□□□□□ -0.88
CLK3-226ENST00000569406 PAX2Q02962 417 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms