RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 C14orf79Q96F83 325 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 REEP6Q96HR9 211 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 NECAP2Q9NVZ3 263 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 LOC102725191A0A1B0GVB3 256 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 LCATP04180 440 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 FKBP2P26885 142 aaKnown RBP12.42□□□□□ -0.42
CDH1-209ENST00000566510 DVL1P1P54792 670 aaPredicted RBP12.42□□□□□ -0.42
CDH1-209ENST00000566510 TMEM268Q5VZI3 342 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 PLXDC2Q6UX71 529 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 BATF2Q8N1L9 274 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 OR5L1Q8NGL2 311 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 RTN4IP1Q8WWV3 396 aaPredicted RBP12.42□□□□□ -0.42
CDH1-209ENST00000566510 DNASE2BQ8WZ79 361 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 BSCL2Q96G97 398 aaPredicted RBP12.42□□□□□ -0.42
CDH1-209ENST00000566510 EIF5A2Q9GZV4 153 aaKnown RBP12.42□□□□□ -0.42
CDH1-209ENST00000566510 AMDHD2Q9Y303 409 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 MED19A0JLT2 244 aaPredicted RBP12.41□□□□□ -0.42
CDH1-209ENST00000566510 MBPP02686 304 aaPredicted RBP12.41□□□□□ -0.42
CDH1-209ENST00000566510 PRH1P02810 166 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 CD5P06127 495 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 PIGYQ3MUY2 71 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 C10orf128Q5T292 105 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 ZNF385CQ66K41 422 aaPredicted RBP12.41□□□□□ -0.42
CDH1-209ENST00000566510 OPN5Q6U736 354 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 LYZL2Q7Z4W2 148 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 MAML2Q8IZL2 1156 aaPredicted RBP12.41□□□□□ -0.42
CDH1-209ENST00000566510 TMEM156Q8N614 296 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 TMEM54Q969K7 222 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 C20orf24Q9BUV8 137 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 TUBD1Q9UJT1 453 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 MASP2O00187 686 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 SGCEO43556 437 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 EIF1BO60739 113 aaKnown RBP12.41□□□□□ -0.42
CDH1-209ENST00000566510 APOC1P02654 83 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 CD63P08962 238 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 FHITP49789 147 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 MIDNQ504T8 468 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 ZNF774Q6NX45 483 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 BORCS8Q96FH0 119 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 NAA11Q9BSU3 229 aaPredicted RBP12.41□□□□□ -0.42
CDH1-209ENST00000566510 CHRDQ9H2X0 955 aa12.41□□□□□ -0.42
CDH1-209ENST00000566510 FAM212BQ9NTI7 297 aaPredicted RBP12.41□□□□□ -0.42
CDH1-209ENST00000566510 MSTNO14793 375 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 GEMIN2O14893 280 aaKnown RBP12.4□□□□□ -0.42
CDH1-209ENST00000566510 SNRNP70P08621 437 aaKnown RBP12.4□□□□□ -0.42
CDH1-209ENST00000566510 PPA1Q15181 289 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 CDCP2Q5VXM1 449 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 SLC22A25Q6T423 547 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 SMCO4Q9NRQ5 59 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 IGKV1-27A0A075B6S5 117 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 M0R036 132 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 DKK1O94907 266 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 CAMLGP49069 296 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 ZNF239Q16600 458 aaKnown RBP12.4□□□□□ -0.42
CDH1-209ENST00000566510 NSUN5P2Q63ZY6 315 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 TMEM123Q8N131 208 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 AKR7LQ8NHP1 331 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 CRLF2Q9HC73 371 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
CDH1-209ENST00000566510 E5RGE8 158 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 RRP8O43159 456 aaKnown RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 C1QL1O75973 258 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 VAMP5O95183 116 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 GAPDHP04406 335 aaKnown RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 HEXAP06865 529 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 OTX1P32242 354 aaPredicted RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 RBP2P50120 134 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 HSD17B11Q8NBQ5 300 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 MARS2Q96GW9 593 aaKnown RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 RGCCQ9H4X1 137 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 NAA60Q9H7X0 242 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 PLEKHA2Q9HB19 425 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 NSG2Q9Y328 171 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 PTRH2Q9Y3E5 179 aaKnown RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 A0A0J9YW62 118 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 COLCA2A8K830 154 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 ZIC3O60481 467 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 ASCL1P50553 236 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 FAM3AP98173 230 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 EIF3IQ13347 325 aaKnown RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 PCOLCEQ15113 449 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 MEX3BQ6ZN04 569 aaKnown RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 OR52M1Q8NGK5 317 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 OR11L1Q8NGX0 322 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 SFT2D1Q8WV19 159 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 MR1Q95460 341 aa12.39□□□□□ -0.43
CDH1-209ENST00000566510 ALKBH3Q96Q83 286 aaPredicted RBP12.39□□□□□ -0.43
CDH1-209ENST00000566510 A0A087WZY1 265 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 BORCS7-ASMTA0A0B4J1R7 106 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 CA11O75493 328 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 LIFP15018 202 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 B4GALT1P15291 398 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 CBR1P16152 277 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 NOVA1P51513 510 aaKnown RBP12.38□□□□□ -0.43
CDH1-209ENST00000566510 DSCR4P56555 118 aaPredicted RBP12.38□□□□□ -0.43
CDH1-209ENST00000566510 RAB5BP61020 215 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms