RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZIC4Q8N9L1 334 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 FNDC5Q8NAU1 212 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ACBD4Q8NC06 268 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TTLQ8NG68 377 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR2M3Q8NG83 312 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR10G2Q8NGC3 310 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR52E4Q8NGH9 312 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR9I1Q8NGQ6 314 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR10D3Q8NH80 312 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 GOT1L1Q8NHS2 421 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 RHEBL1Q8TAI7 183 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 NUBPLQ8TB37 319 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 FAM110BQ8TC76 370 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ABHD3Q8WU67 409 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZCCHC13Q8WW36 166 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 IL1F10Q8WWZ1 152 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZNF75CPQ92670 426 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 ANP32BQ92688 251 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 CDKL2Q92772 493 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 DLX4Q92988 240 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 UBE2E3Q969T4 207 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 S100PBPQ96BU1 408 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SLC25A36Q96CQ1 311 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TUBGCP3Q96CW5 907 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LRRC39Q96DD0 335 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MRPL53Q96EL3 112 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 AURKBQ96GD4 344 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 ARL5BQ96KC2 179 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 RNF145Q96MT1 663 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 VSTM2LQ96N03 204 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR52B2Q96RD2 323 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR52E6Q96RD3 313 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZNF382Q96SR6 550 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SDF2Q99470 211 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SORT1Q99523 831 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 COQ7Q99807 217 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MED18Q9BUE0 208 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 EFCAB11Q9BUY7 163 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 EMC6Q9BV81 110 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CAPS2Q9BXY5 557 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SRXN1Q9BYN0 137 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TBL1XR1Q9BZK7 514 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ULBP2Q9BZM5 246 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR11A1Q9GZK7 315 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 IQCGQ9H095 443 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 RAB17Q9H0T7 212 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TSPYL1Q9H0U9 437 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 OR51B6Q9H340 312 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 REEP4Q9H6H4 257 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LRTM1Q9HBL6 345 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 POPDC3Q9HBV1 291 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MCCC2Q9HCC0 563 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SLCO1B3Q9NPD5 702 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 FANCFQ9NPI8 374 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MEPEQ9NQ76 525 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 RRAGDQ9NQL2 400 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 CTPS2Q9NRF8 586 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 C14orf105Q9NVL8 296 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 C1orf109Q9NX04 203 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LYARQ9NX58 379 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 TREM2Q9NZC2 230 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MTRF1LQ9UGC7 380 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 PURGQ9UJV8 347 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 DKKL1Q9UK85 242 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 BOKQ9UMX3 212 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 SNX6Q9UNH7 406 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 MRPS33Q9Y291 106 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 C15orf41Q9Y2V0 281 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 KLF13Q9Y2Y9 288 aaPredicted RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 WDR45Q9Y484 360 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ZNF780BQ9Y6R6 833 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 COL6A5A8TX70 2615 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 DYSFO75923 2080 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 DOCK11Q5JSL3 2073 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 DYNC2H1Q8NCM8 4307 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 EXPH5Q8NEV8 1989 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 KMT2CQ8NEZ4 4911 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 TENM1Q9UKZ4 2725 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 NBEAL1Q6ZS30 2694 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TMED7-TICAM2A0A0A6YYA0 188 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 LOC100653049A0A140TA62 436 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TMEM120BA0PK00 339 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TMEM72A0PK05 275 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 LRP5LA4QPB2 252 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 GOLGA6L10A6NI86 522 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR6C70A6NIJ9 312 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 E9PBE3 544 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 M0R1B8 84 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 M0R3G1 203 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SULT2B1O00204 365 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SLC28A1O00337 649 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 HMGN4O00479 90 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SDHDO14521 159 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 BCKDKO14874 412 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 CASKO14936 926 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SCAMP2O15127 329 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 RGS16O15492 202 aaPredicted RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 HCN1O60741 890 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SCN2BO60939 215 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 GCM2O75603 506 aaPredicted RBP0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms