RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 OR2J2O76002 312 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 TNFAIP8O95379 198 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 CNIH1O95406 144 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 FAM107AO95990 144 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 NDUFB10O96000 172 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 BGLAPP02818 100 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SERPINE2P07093 398 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SMIM10L1P0DMW3 83 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 GTF2F2P13984 249 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 STOMP27105 288 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 CD1CP29017 333 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 ERP29P30040 261 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 OTX1P32242 354 aaPredicted RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 ARR3P36575 388 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 VHLP40337 213 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 PMELP40967 661 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 RPS9P46781 194 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 NPBWR2P48146 333 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 UBE2AP49459 152 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SUB1P53999 127 aaKnown RBP eCLIP2.04□□□□□ -2.08
PALB2-204ENST00000566069 TAS2R39P59534 338 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 DNAJB13P59910 316 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 CCL7P80098 99 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 RPL19P84098 196 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 ZNF616Q08AN1 781 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SKP2Q13309 424 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SPA17Q15506 151 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 DEFB116Q30KQ4 102 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 ACSBG2Q5FVE4 666 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 RNASE10Q5GAN6 216 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 FBXW9Q5XUX1 488 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 OR2A2Q6IF42 318 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 APOBEC3HQ6NTF7 200 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 RWDD4Q6NW29 188 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 TRIM40Q6P9F5 258 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 GRINAQ7Z429 371 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 TMEM144Q7Z5S9 345 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 TMED4Q7Z7H5 227 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 LYG2Q86SG7 212 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 PBRM1Q86U86 1689 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 KTN1Q86UP2 1357 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 CALHM1Q8IU99 346 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 ZBTB8OSQ8IWT0 167 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 CMTM8Q8IZV2 173 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SLC35F6Q8N357 371 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 C2orf73Q8N5S3 287 aaPredicted RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 EIF4E3Q8N5X7 224 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 TMEM251Q8N6I4 163 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 LRRC75AQ8NAA5 344 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 CARMIL3Q8ND23 1372 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 OR51D1Q8NGF3 324 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 OR9G4Q8NGQ1 327 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 OR13D1Q8NGV5 346 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 OR10K1Q8NGX5 313 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 NUBPLQ8TB37 319 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 CD200R1Q8TD46 325 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 ABHD3Q8WU67 409 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SDR42E1Q8WUS8 393 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 TMEM239Q8WW34 195 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 CREB3L1Q96BA8 519 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 DCPSQ96C86 337 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 LRRC58Q96CX6 371 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 ZHX1-C8orf76Q96EF9 292 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SMIM12Q96EX1 92 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 MED8Q96G25 268 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 AURKBQ96GD4 344 aaPredicted RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 SMIM10Q96HG1 83 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 NARS2Q96I59 477 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 BIRC8Q96P09 236 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 STACQ99469 402 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 KCTD14Q9BQ13 255 aaPredicted RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 DDA1Q9BW61 102 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 FAIM2Q9BWQ8 316 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 UCK2Q9BZX2 261 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 ING2Q9H160 280 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 PORCNQ9H237 461 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 TMEM38AQ9H6F2 299 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 PLEKHA1Q9HB21 404 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 NMRAL1Q9HBL8 299 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 ANKHQ9HCJ1 492 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 HRASLSQ9HDD0 168 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 PLEKHJ1Q9NW61 149 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 C1orf109Q9NX04 203 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 LYARQ9NX58 379 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 KDM5BQ9UGL1 1544 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 SMPXQ9UHP9 88 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 GNG8Q9UK08 70 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 OR52A1Q9UKL2 312 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 ING4Q9UNL4 249 aa2.04□□□□□ -2.08
PALB2-204ENST00000566069 UTP11Q9Y3A2 253 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 CSDC2Q9Y534 153 aaKnown RBP2.04□□□□□ -2.08
PALB2-204ENST00000566069 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
PALB2-204ENST00000566069 NAV1Q8NEY1 1877 aa2.03□□□□□ -2.08
PALB2-204ENST00000566069 WRNQ14191 1432 aaPredicted RBP eCLIP2.03□□□□□ -2.08
PALB2-204ENST00000566069 ARHGAP31Q2M1Z3 1444 aa2.03□□□□□ -2.08
PALB2-204ENST00000566069 CEP162Q5TB80 1403 aa2.03□□□□□ -2.08
PALB2-204ENST00000566069 SMG6Q86US8 1419 aaKnown RBP2.03□□□□□ -2.08
PALB2-204ENST00000566069 MROH7-TTC4A0A0A0MT08 1334 aa2.03□□□□□ -2.08
PALB2-204ENST00000566069 ZNF532Q9HCE3 1301 aa2.03□□□□□ -2.08
PALB2-204ENST00000566069 PLAC8L1A1L4L8 177 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms