RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 OR2T6Q8NHC8 308 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 ASB17Q8WXJ9 295 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 APOL4Q9BPW4 351 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 TTTY10Q9BZA0 68 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF702PQ9H963 129 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 RAB18Q9NP72 206 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 GPR173Q9NS66 373 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 TVP23BQ9NYZ1 205 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 DNAJB9Q9UBS3 223 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 ENPP5Q9UJA9 477 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 DNAH9Q9NYC9 4486 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 PLXNB1O43157 2135 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 A0A1W2PPH5 198 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 TCRBV3S1A0A5B6 114 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 ADARB2-AS1A8MUL3 147 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 ODF3BA8MYP8 253 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 F8VVB4 439 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 F8VWA3 439 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 K7N7A8 449 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 SLC1A7O00341 560 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF737O75373 536 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 PRB2P02812 416 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 HOXB6P17509 224 aaKnown RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 COX7A1P24310 79 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 EPHA2P29317 976 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 CXCR4P61073 352 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 HABP2Q14520 560 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF829Q3KNS6 432 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 CLVS2Q5SYC1 327 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 LCN1P1Q5VSP4 162 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 AADACL4Q5VUY2 407 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF322Q6U7Q0 402 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 Q6ZPA2 131 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 LIAT1Q6ZQX7 453 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 PLEKHG7Q6ZR37 379 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 MEPCEQ7L2J0 689 aaKnown RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 COMMD2Q86X83 199 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 ANGPTL5Q86XS5 388 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 LYG1Q8N1E2 194 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 BATF2Q8N1L9 274 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 UTP4Q969X6 686 aaKnown RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 NRBF2Q96F24 287 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 CNN2Q99439 309 aaKnown RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 NPFFR1Q9GZQ6 430 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 ADGRL4Q9HBW9 690 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 PAPOLBQ9NRJ5 636 aaKnown RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 USE1Q9NZ43 259 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 MRM2Q9UI43 246 aaKnown RBP6.93□□□□□ -1.3
CAPN3-213ENST00000565173 OR52A1Q9UKL2 312 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 TMEM14AQ9Y6G1 99 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 R4GMQ9 66 aa6.93□□□□□ -1.3
CAPN3-213ENST00000565173 IGKV1-27A0A075B6S5 117 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 hCG_1809904A0A1W2PP81 198 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 A0A1W2PPE2 198 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 A0A1W2PR64 198 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 A0A1W2PRV1 198 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 A6NDX4 124 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 DHRS7CA6NNS2 312 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 LOC110117498-PIK3R3F6TDL0 507 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 M0R129 80 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 FKBP6O75344 327 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 NXPH2O95156 264 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 VSIG10L2P0DP72 767 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 CD28P10747 220 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 CCL1P22362 96 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 LGALS4P56470 323 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 COL10A1Q03692 680 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 IL24Q13007 206 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 UBE2V2Q15819 145 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 BCL2L15Q5TBC7 163 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF626Q68DY1 528 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF782Q6ZMW2 699 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-213ENST00000565173 Q6ZS46 218 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 SSX6Q7RTT6 188 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 OR11H6Q8NGC7 330 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 DNAJC9Q8WXX5 260 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 MALSU1Q96EH3 234 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 CDCA4Q9BXL8 241 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 TEX12Q9BXU0 123 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 PKIBQ9C010 78 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 MMP28Q9H239 520 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 MOB1AQ9H8S9 216 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 MTCH1Q9NZJ7 389 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 OR14J1Q9UGF5 321 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 IKZF2Q9UKS7 526 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 SLC22A13Q9Y226 551 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 TCF19Q9Y242 345 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 POLDIP2Q9Y2S7 368 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 SNX5Q9Y5X3 404 aa6.92□□□□□ -1.3
CAPN3-213ENST00000565173 TMEM82A0PJX8 343 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 MEX3AA1L020 520 aaKnown RBP6.91□□□□□ -1.3
CAPN3-213ENST00000565173 ZAR1LA6NP61 321 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 RBP4P02753 201 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 ARG1P05089 322 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF728P0DKX0 622 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 IGHV1-8P0DP01 117 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 PIPP12273 146 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-213ENST00000565173 JUNBP17275 347 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-213ENST00000565173 DYNLT3P51808 116 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms