RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 IGKV1-27A0A075B6S5 117 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 A0A0G2JMP0 313 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 A0A0X1KG70 313 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 A0A1W2PPK0 400 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 TNFRSF13BO14836 293 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 NDUFB3O43676 98 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 ALDOBP05062 364 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 BDKRB2P30411 391 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 SEC61A1P61619 476 aaKnown RBP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 RPS11P62280 158 aaKnown RBP eCLIP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 EMX1Q04741 257 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 MLLT11Q13015 90 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 TPBGQ13641 420 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 TRAM1Q15629 374 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 KISS1Q15726 138 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 ACSM3Q53FZ2 586 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 LRRC10Q5BKY1 277 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 ATPAF1Q5TC12 328 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 LIPKQ5VXJ0 399 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 WDR25Q64LD2 544 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 FIP1L1Q6UN15 594 aaKnown RBP13.33□□□□□ -0.28
RAB40C-208ENST00000564703 ACP7Q6ZNF0 438 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 ZNF367Q7RTV3 350 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 OR4M2Q8NGB6 313 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 SLAMF9Q96A28 289 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 RFT1Q96AA3 541 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 ZNF488Q96MN9 340 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 SPACA5Q96QH8 159 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 NRIP2Q9BQI9 281 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 BEX2Q9BXY8 128 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 SHARPINQ9H0F6 387 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 ACOT13Q9NPJ3 140 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 TMEM160Q9NX00 188 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 MTCH1Q9NZJ7 389 aa13.33□□□□□ -0.28
RAB40C-208ENST00000564703 LOC105371242A0A075B767 164 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 PPIAL4CA0A0B4J2A2 164 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 RFPL4AA6NLU0 287 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 INAFM1C9JVW0 142 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 RFPL4AL1F8VTS6 287 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 SPRY1O43609 319 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-208ENST00000564703 PSG2P11465 335 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 PSMA1P25786 263 aaKnown RBP13.32□□□□□ -0.28
RAB40C-208ENST00000564703 ZFP36P26651 326 aaKnown RBP13.32□□□□□ -0.28
RAB40C-208ENST00000564703 CR1LQ2VPA4 569 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 BTNL3Q6UXE8 466 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 SPARTQ8N0X7 666 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 PNLDC1Q8NA58 520 aaKnown RBP13.32□□□□□ -0.28
RAB40C-208ENST00000564703 S100A13Q99584 98 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 LPAR3Q9UBY5 353 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 GLS2Q9UI32 602 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 FOXJ3Q9UPW0 622 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 POLR3KQ9Y2Y1 108 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-208ENST00000564703 WNK2Q9Y3S1 2297 aa13.32□□□□□ -0.28
RAB40C-208ENST00000564703 MEGF11A6BM72 1044 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 A8MXK9 166 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 DVL1O14640 695 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 GPX5O75715 221 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ECDO95905 644 aaPredicted RBP13.31□□□□□ -0.28
RAB40C-208ENST00000564703 CPEP16870 476 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 PRDX2P32119 198 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ZNF93P35789 620 aaPredicted RBP13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ERVK11-1P61568 191 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 IL13RA1P78552 427 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 IKZF1Q13422 519 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 DOC2BQ14184 412 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 C11orf91Q3C1V1 193 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ARMCX4Q5H9R4 360 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 STUMQ69YW2 141 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ZNF529Q6P280 563 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 CEACAM19Q7Z692 300 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 SAXO1Q8IYX7 474 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 BATF2Q8N1L9 274 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 TEX29Q8N6K0 151 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
RAB40C-208ENST00000564703 OR52N4Q8NGI2 321 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 OR5D18Q8NGL1 313 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ANGPTL6Q8NI99 470 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 FCGR1BQ92637 280 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 TMEM203Q969S6 136 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 DERL3Q96Q80 235 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ELL3Q9HB65 397 aaPredicted RBP13.31□□□□□ -0.28
RAB40C-208ENST00000564703 RHOFQ9HBH0 211 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 SMURF1Q9HCE7 757 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 TCF7L1Q9HCS4 588 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 NOX4Q9NPH5 578 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 OR14J1Q9UGF5 321 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 CDC42EP3Q9UKI2 254 aa13.31□□□□□ -0.28
RAB40C-208ENST00000564703 ARHGAP32A7KAX9 2087 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 ZANQ9Y493 2812 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 TRBV5-7A0A0A0MS05 114 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 J3QLI3 93 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 GPR37O15354 613 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 ANGPTL7O43827 346 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 KNG1P01042 644 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 MAS1P04201 325 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 CAPZA1P52907 286 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 CHRFAM7AQ494W8 412 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 KCTD21Q4G0X4 260 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 FAM120AOSQ5T036 256 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms