RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	TMEM217	Q8N7C4	229 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	FRRS1L	Q9P0K9	344 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	COCH	O43405	550 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	TNF	P01375	233 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	ESD	P10768	282 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	TAS2R45	P59539	299 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	ACSF3	Q4G176	576 aa	Predicted RBP	3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	WNT2B	Q93097	391 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	SNX22	Q96L94	193 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	TMEM106C	Q9BVX2	250 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	SLC23A2	Q9UGH3	650 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	RABAC1	Q9UI14	185 aa		3.81	□□□□□ -1.8
MACF1-231	ENST00000564288	IGLV3-16	A0A075B6K0	115 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	FAM27D1	Q5T7N8	215 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	OR8B4	Q96RC9	309 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	NTSR1	P30989	418 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	TIAL1	Q01085	375 aa	Known RBP eCLIP	3.8	□□□□□ -1.8	9e-9	■■■■■ 29.1
MACF1-231	ENST00000564288	RUNX2	Q13950	521 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	LAT2	Q9GZY6	243 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	TNFRSF10C	O14798	259 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	MFAP5	Q13361	173 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	FAM71F1	Q96KD3	344 aa	Predicted RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	SLC11A1	P49279	550 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	PAX2	Q02962	417 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	SUMF1	Q8NBK3	374 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	CPT1C	Q8TCG5	803 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	NUS1	Q96E22	293 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	IL36A	Q9UHA7	158 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288		A0A1B0GTI1	187 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	TMEM251	Q8N6I4	163 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	ZCCHC14	Q8WYQ9	949 aa	Known RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	MUCL1	Q96DR8	90 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	OR4C45	A6NMZ5	311 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	REG1A	P05451	166 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	ADCYAP1R1	P41586	468 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	EMC9	Q9Y3B6	208 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	ABCA4	P78363	2273 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BK	O60814	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	OR2J2	O76002	312 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	IGLV3-27	P01718	113 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BJ	P06899	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BO	P23527	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BB	P33778	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	CCR2	P41597	374 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BD	P58876	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BC	P62807	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	LSM11	P83369	360 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	PLP2	Q04941	152 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST2H2BE	Q16778	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	OCIAD2	Q56VL3	154 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	PNPLA1	Q8N8W4	532 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BH	Q93079	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288		Q96M85	177 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	DMRTA2	Q96SC8	542 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BN	Q99877	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HIST1H2BM	Q99879	126 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	C16orf70	Q9BSU1	422 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	COA6	Q5JTJ3	125 aa	Known RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	VWA1	Q6PCB0	445 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	MED25	Q71SY5	747 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	OR4D6	Q8NGJ1	314 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	FBXO34	Q9NWN3	711 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	LHX3	Q9UBR4	397 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	VSTM2B	A6NLU5	285 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	ZBTB42	B2RXF5	422 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	SAMD13	Q5VXD3	122 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	SYT9	Q86SS6	491 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	KREMEN2	Q8NCW0	462 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	IFITM10	A6NMD0	228 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	HBZ	P02008	142 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	NUBP1	P53384	320 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	LSM6	P62312	80 aa	Known RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	SP3	Q02447	781 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	C17orf67	Q0P5P2	114 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	CNN3	Q15417	329 aa	Known RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	KCNE4	Q8WWG9	221 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	KLF16	Q9BXK1	252 aa	Predicted RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	MS4A8	Q9BY19	250 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	F3	P13726	295 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	UCP3	P55916	312 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	OR4X1	Q8NH49	305 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	ALG14	Q96F25	216 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	SCGB1C2	P0DMR2	95 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	BCL3	P20749	454 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	GRB2	P62993	217 aa	Known RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	VN1R17P	Q8TDU5	208 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	ST6GALNAC2	Q9UJ37	374 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	TRAPPC2L	Q9UL33	140 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	DNAJC25-GNG10	A0A024R161	153 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	TRAV9-2	A0A087WT02	112 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	APCS	P02743	223 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	TMEM106B	Q9NUM4	274 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	PSENEN	Q9NZ42	101 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	SLC45A2	Q9UMX9	530 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	OR51B2	Q9Y5P1	312 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	LINC01549	A6NIU2	74 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	P2RY10	O00398	339 aa		3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	WDR25	Q64LD2	544 aa	Predicted RBP	3.8	□□□□□ -1.8
MACF1-231	ENST00000564288	MFSD12	Q6NUT3	480 aa		3.8	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms