RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 EGR1P18146 543 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 BDKRB2P30411 391 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 CD80P33681 288 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 GNB2P62879 340 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 SFRP4Q6FHJ7 346 aaPredicted RBP13.93□□□□□ -0.18
RNF40-206ENST00000564260 ACP7Q6ZNF0 438 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 PHC2Q8IXK0 858 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 PNLDC1Q8NA58 520 aaKnown RBP13.93□□□□□ -0.18
RNF40-206ENST00000564260 OR14A2Q96R54 314 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 PCDHB16Q9NRJ7 776 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 OR5V1Q9UGF6 321 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 HIVEP2P31629 2446 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 A0A0G2JMP0 313 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 A0A0X1KG70 313 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 TRAPPC2LH3BP13 241 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 ADAM20O43506 726 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 SYNGR1O43759 233 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 ARL6IP5O75915 188 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 KDM4BO94953 1096 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 LIPFP07098 398 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 HSMCR30P0CW71 290 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 IL13RA1P78552 427 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 ACSM3Q53FZ2 586 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 SPIN3Q5JUX0 258 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 FAM201AQ5SY85 155 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 LIPKQ5VXJ0 399 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 ZNF841Q6ZN19 808 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 ZNF788Q6ZQV5 615 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 SLC25A26Q70HW3 274 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 ANGPTL5Q86XS5 388 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 BOLLQ8N9W6 283 aaKnown RBP13.92□□□□□ -0.18
RNF40-206ENST00000564260 DEFB108BQ8NET1 73 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 OR4M2Q8NGB6 313 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 NPRL2Q8WTW4 380 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 SDSLQ96GA7 329 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 SMR3AQ99954 134 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 HIF1ANQ9NWT6 349 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 TAS2R4Q9NYW5 299 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 CDC42EP3Q9UKI2 254 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 CSPG4Q6UVK1 2322 aa13.92□□□□□ -0.18
RNF40-206ENST00000564260 PNMA8CA0A1B0GUJ8 204 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 SIGLEC5O15389 551 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 TMPRSS2O15393 492 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 ZNF780AO75290 641 aaPredicted RBP13.91□□□□□ -0.18
RNF40-206ENST00000564260 ZNF205O95201 554 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 GYPAP02724 150 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 PPIAL4GP0DN37 164 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 HNF1AP20823 631 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 TGFBR2P37173 567 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 LRRC10Q5BKY1 277 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 WDR25Q64LD2 544 aaPredicted RBP13.91□□□□□ -0.18
RNF40-206ENST00000564260 ASPHD2Q6ICH7 369 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 ZNF561Q8N587 486 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 FOXRED1Q96CU9 486 aaPredicted RBP13.91□□□□□ -0.18
RNF40-206ENST00000564260 UQCC2Q9BRT2 126 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 FAM234AQ9H0X4 552 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 WDR13Q9H1Z4 485 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 GSX1Q9H4S2 264 aaPredicted RBP13.91□□□□□ -0.18
RNF40-206ENST00000564260 VCX3AQ9NNX9 186 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 NDUFB11Q9NX14 153 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 MTCH1Q9NZJ7 389 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 GLS2Q9UI32 602 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 ZNF222Q9UK12 451 aa13.91□□□□□ -0.18
RNF40-206ENST00000564260 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.91□□□□□ -0.181e-8■■■■□ 25.3
RNF40-206ENST00000564260 ABCA1O95477 2261 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 NSD1Q96L73 2696 aaPredicted RBP13.9□□□□□ -0.18
RNF40-206ENST00000564260 A0A087WXM4 84 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 KIAA1324LA8MWY0 1029 aaPredicted RBP13.9□□□□□ -0.18
RNF40-206ENST00000564260 CCRL2O00421 344 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 UCHL1P09936 223 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 PSG2P11465 335 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 ZNF93P35789 620 aaPredicted RBP13.9□□□□□ -0.18
RNF40-206ENST00000564260 MAP2K4P45985 399 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 CAV3P56539 151 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 ZP1P60852 638 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 ZNF146Q15072 292 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 ARMCX4Q5H9R4 360 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 DMRTC1Q5HYR2 192 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 DDI2Q5TDH0 399 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 ELP2Q6IA86 826 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 ASCL4Q6XD76 172 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 Q8NFD4 153 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 OR13C5Q8NGS8 318 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 TMED9Q9BVK6 235 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 SLITRK2Q9H156 845 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 ZNF696Q9H7X3 374 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 SMURF1Q9HCE7 757 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 TCF7L1Q9HCS4 588 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 NOX4Q9NPH5 578 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 YAE1D1Q9NRH1 226 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 IL36GQ9NZH8 169 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 GHRLQ9UBU3 117 aa13.9□□□□□ -0.18
RNF40-206ENST00000564260 NDUFB3O43676 98 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 ENSAO43768 121 aaKnown RBP13.89□□□□□ -0.19
RNF40-206ENST00000564260 RGS9O75916 674 aaPredicted RBP13.89□□□□□ -0.19
RNF40-206ENST00000564260 MTNR1BP49286 362 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 POU3F4P49335 361 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 GPR176Q14439 515 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 HSD17B12Q53GQ0 312 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 DCAF12L2Q5VW00 463 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms