RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 PNPLA2Q96AD5 504 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 DNAJC30Q96LL9 226 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 ATF6BQ99941 703 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 MAP1LC3AQ9H492 121 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 HEYLQ9NQ87 328 aaPredicted RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 TAS2R16Q9NYV7 291 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 MMP17Q9ULZ9 603 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 LOC102723996A0A087X1L8 192 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 A0A0G2JLL6 359 aaPredicted RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 NAP1L6A6NFF2 107 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 SNRPGP15A8MWD9 76 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 ARPC2O15144 300 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 NUDT3O95989 172 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 HLA-DQB2P05538 268 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 HOXB9P17482 250 aaPredicted RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 RPL3P39023 403 aaKnown RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 FKBP1AP62942 108 aaKnown RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 SLC25A11Q02978 314 aaKnown RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 DUSP2Q05923 314 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 APOOLQ6UXV4 268 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 Q6ZSR9 355 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 PRRT2Q7Z6L0 340 aaPredicted RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 OR2T12Q8NG77 320 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 SLC25A46Q96AG3 418 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 GATA5Q9BWX5 397 aaPredicted RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 FAM206AQ9NX38 181 aa5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 MRPS16Q9Y3D3 137 aaKnown RBP5.24□□□□□ -1.57
TUBGCP4-207ENST00000563963 A0A1W2PRE2 83 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 A8MZ25 164 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 UMAD1C9J7I0 102 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 M0R082 166 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 SDHDO14521 159 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 NKX2-8O15522 239 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 TRAPPC6AO75865 159 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 OR7C1O76099 320 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 DIRAS1O95057 198 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 C1QTNF9P0C862 333 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 TNFRSF1BP20333 461 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 UBE2MP61081 183 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 TCP10Q12799 353 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 PSAPL1Q6NUJ1 521 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 PWWP2BQ6NUJ5 590 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 TPRG1Q6ZUI0 275 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 ZNF417Q8TAU3 575 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 ATXN7L3BQ96GX2 97 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 LRRC3BQ96PB8 259 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 ZNF670Q9BS34 389 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 POLR2J3Q9H1A7 115 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 PATZ1Q9HBE1 687 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 GPR35Q9HC97 309 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 EXOSC3Q9NQT5 275 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 AK3Q9UIJ7 227 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 USP9XQ93008 2570 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 H7C1C5 153 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 M0R1X1 148 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 UPK1AO00322 258 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 EIF4E2O60573 245 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 CRYAAP02489 173 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 ATP6V0CP27449 155 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 PTH2RP49190 550 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 DHRS2Q13268 280 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 AMMECR1LQ6DCA0 310 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 NEIL3Q8TAT5 605 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 ZNF519Q8TB69 540 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 SMIM19Q96E16 107 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 PCED1BQ96HM7 432 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 HPDLQ96IR7 371 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 ORAI3Q9BRQ5 295 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 POPDC3Q9HBV1 291 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 KLK14Q9P0G3 267 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 SLC25A10Q9UBX3 287 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 COA3Q9Y2R0 106 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 KAT6AQ92794 2004 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 OTOL1A6NHN0 477 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 SLC38A8A6NNN8 435 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 K7EN84 100 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 DCTN6O00399 190 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 DUSP11O75319 330 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 CD160O95971 181 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 ATF1P18846 271 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 RAB6CQ53S08 254 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 LYPLAL1Q5VWZ2 237 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 CBLN3Q6UW01 205 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 PLXDC2Q6UX71 529 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 D2HGDHQ8N465 521 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 NUP43Q8NFH3 380 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 PIGCQ92535 297 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 SDSLQ96GA7 329 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 OXGR1Q96P68 337 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 TSSK2Q96PF2 358 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 JMJD8Q96S16 334 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 SNRNP25Q9BV90 132 aaKnown RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 RAB6CQ9H0N0 254 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 Q9N2K0 584 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 PRSS16Q9NQE7 514 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 FBLN5Q9UBX5 448 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 SOX21Q9Y651 276 aaPredicted RBP5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 A0A1B0GUS0 222 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 GXYLT2A0PJZ3 443 aa5.23□□□□□ -1.57
TUBGCP4-207ENST00000563963 LRP5LA4QPB2 252 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms