RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 Q6ZS46 218 aa15.01□□□□□ -0.01
NME3-204ENST00000563498 DHFR2Q86XF0 187 aa15.01□□□□□ -0.01
NME3-204ENST00000563498 ARHGAP24Q8N264 748 aa15.01□□□□□ -0.01
NME3-204ENST00000563498 OCSTAMPQ9BR26 566 aa15.01□□□□□ -0.01
NME3-204ENST00000563498 FAM107BQ9H098 131 aa15.01□□□□□ -0.01
NME3-204ENST00000563498 K7EIL1 84 aa15□□□□□ -0.01
NME3-204ENST00000563498 F2RL2O00254 374 aa15□□□□□ -0.01
NME3-204ENST00000563498 DLGAP1O14490 977 aa15□□□□□ -0.01
NME3-204ENST00000563498 IGHV1-8P0DP01 117 aa15□□□□□ -0.01
NME3-204ENST00000563498 PIPP12273 146 aaPredicted RBP15□□□□□ -0.01
NME3-204ENST00000563498 AZGP1P25311 298 aaKnown RBP15□□□□□ -0.01
NME3-204ENST00000563498 OR12D2P58182 307 aa15□□□□□ -0.01
NME3-204ENST00000563498 ERVK11-1P61568 191 aa15□□□□□ -0.01
NME3-204ENST00000563498 RPS7P62081 194 aaKnown RBP15□□□□□ -0.01
NME3-204ENST00000563498 CDK5Q00535 292 aa15□□□□□ -0.01
NME3-204ENST00000563498 ZNF829Q3KNS6 432 aaPredicted RBP15□□□□□ -0.01
NME3-204ENST00000563498 CLVS2Q5SYC1 327 aa15□□□□□ -0.01
NME3-204ENST00000563498 MINOS1Q5TGZ0 78 aa15□□□□□ -0.01
NME3-204ENST00000563498 ZNF679Q8IYX0 411 aa15□□□□□ -0.01
NME3-204ENST00000563498 BBS1Q8NFJ9 593 aa15□□□□□ -0.01
NME3-204ENST00000563498 OR5AU1Q8NGC0 362 aa15□□□□□ -0.01
NME3-204ENST00000563498 OR14J1Q9UGF5 321 aa15□□□□□ -0.01
NME3-204ENST00000563498 MINOS1-NBL1R4GNA1 71 aa15□□□□□ -0.01
NME3-204ENST00000563498 COL7A1Q02388 2944 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 FAM90A22PA8MWA6 464 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 H3BUI4 141 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 PSMD9O00233 223 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 ZNF737O75373 536 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 E2F6O75461 281 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 RAP2AP10114 183 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 PF4V1P10720 104 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 MNAT1P51948 309 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 HCCSP53701 268 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 SLC35A2P78381 396 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 TRIM25Q14258 630 aaKnown RBP14.99□□□□□ -0.01
NME3-204ENST00000563498 ASB17Q8WXJ9 295 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 PKIBQ9C010 78 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 DNAJB9Q9UBS3 223 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.99□□□□□ -0.01
NME3-204ENST00000563498 SLC22A13Q9Y226 551 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 TMEM14AQ9Y6G1 99 aa14.99□□□□□ -0.01
NME3-204ENST00000563498 DUS4LO95620 317 aaKnown RBP14.98□□□□□ -0.01
NME3-204ENST00000563498 TTRP02766 147 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 CHRM2P08172 466 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 OSMP13725 252 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 RIDAP52758 137 aaKnown RBP14.98□□□□□ -0.01
NME3-204ENST00000563498 COL10A1Q03692 680 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 MEF2CQ06413 473 aaPredicted RBP14.98□□□□□ -0.01
NME3-204ENST00000563498 IL24Q13007 206 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 DYNC1I2Q13409 638 aaKnown RBP14.98□□□□□ -0.01
NME3-204ENST00000563498 TMEM95Q3KNT9 176 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 GDPD3Q7L5L3 318 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 ASCC1Q8N9N2 400 aaKnown RBP14.98□□□□□ -0.01
NME3-204ENST00000563498 RCC1LQ96I51 464 aaKnown RBP14.98□□□□□ -0.01
NME3-204ENST00000563498 ZNF714Q96N38 554 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 MOB1AQ9H8S9 216 aa14.98□□□□□ -0.01
NME3-204ENST00000563498 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.98□□□□□ -0.01
NME3-204ENST00000563498 A0A1W2PRX2 142 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 DHRS7CA6NNS2 312 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 PRR32B1ATL7 298 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 SRSF10O75494 262 aaKnown RBP14.97□□□□□ -0.01
NME3-204ENST00000563498 CST1P01037 141 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 EDDM3BP56851 147 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 SLC34A1Q06495 639 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 MFGE8Q08431 387 aaPredicted RBP14.97□□□□□ -0.01
NME3-204ENST00000563498 APOFQ13790 326 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 Q6ZSR3 168 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 ASRGL1Q7L266 308 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 C16orf82Q7Z2V1 217 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 OR8H2Q8N162 312 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 TEX12Q9BXU0 123 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 ZNF556Q9HAH1 456 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 GPR173Q9NS66 373 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 HILPDAQ9Y5L2 63 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 TSSC4Q9Y5U2 329 aaPredicted RBP14.97□□□□□ -0.01
NME3-204ENST00000563498 V9GYS6 101 aa14.97□□□□□ -0.01
NME3-204ENST00000563498 DCTN3O75935 186 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 DNAJC8O75937 253 aaPredicted RBP14.96□□□□□ -0.01
NME3-204ENST00000563498 PF4P02776 101 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 ACTA2P62736 377 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 ACTG2P63267 376 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 ACTC1P68032 377 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 ACTA1P68133 377 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 MS4A2Q01362 244 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 TCTEX1D4Q5JR98 221 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 ZBTB49Q6ZSB9 765 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 TCF23Q7RTU1 214 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 BATF2Q8N1L9 274 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 AKR1E2Q96JD6 320 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 CHID1Q9BWS9 393 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 SLC25A19Q9HC21 320 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 ARL2BPQ9Y2Y0 163 aa14.96□□□□□ -0.01
NME3-204ENST00000563498 DSCAML1Q8TD84 2053 aa14.96□□□□□ -0.02
NME3-204ENST00000563498 RYR3Q15413 4870 aa14.95□□□□□ -0.02
NME3-204ENST00000563498 TENM3Q9P273 2699 aa14.95□□□□□ -0.02
NME3-204ENST00000563498 IGHV2-26A0A0B4J1V2 119 aa14.95□□□□□ -0.02
NME3-204ENST00000563498 hADV38S2A0JD32 116 aa14.95□□□□□ -0.02
NME3-204ENST00000563498 LOC110117498-PIK3R3F6TDL0 507 aa14.95□□□□□ -0.02
NME3-204ENST00000563498 RRP9O43818 475 aaKnown RBP14.95□□□□□ -0.02
NME3-204ENST00000563498 MRPL3P09001 348 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms