RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 A0A1W2PPR1 153 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 CLEC18AA5D8T8 446 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 METTL21EPA6NDL7 271 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 B9A039 149 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 PRSS44E7EML9 344 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 RAB27BO00194 218 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 CYB5AP00167 134 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 HLA-DQB1P01920 261 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 RBMXP38159 391 aaKnown RBP8.61□□□□□ -1.03
SMG1-208ENST00000563448 NR4A2P43354 598 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 VEGFCP49767 419 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 TAS2R20P59543 309 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 MZT1Q08AG7 82 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 PYDC2Q56P42 97 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 TMEM69Q5SWH9 247 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 ELP2Q6IA86 826 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 PYHIN1Q6K0P9 492 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 CLEC18BQ6UXF7 455 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 BAIAP2L2Q6UXY1 529 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 CLEC18CQ8NCF0 446 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 ITLN1Q8WWA0 313 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 MEGF10Q96KG7 1140 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 Q96M66 194 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 OR2V2Q96R30 315 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 SELENOIQ9C0D9 397 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 DIABLOQ9NR28 239 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 UFSP2Q9NUQ7 469 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 RBFOX1Q9NWB1 397 aaKnown RBP8.61□□□□□ -1.03
SMG1-208ENST00000563448 MRPS7Q9Y2R9 242 aaKnown RBP8.61□□□□□ -1.03
SMG1-208ENST00000563448 UBR5O95071 2799 aaPredicted RBP8.61□□□□□ -1.03
SMG1-208ENST00000563448 DOPEY1Q5JWR5 2465 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 USP9XQ93008 2570 aaPredicted RBP8.6□□□□□ -1.03
SMG1-208ENST00000563448 TRAV18A0A075B6X5 111 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
SMG1-208ENST00000563448 C17orf100A8MU93 164 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 TRAPPC2LH3BP13 241 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 SOCS1O15524 211 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 ADH4P08319 380 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 PTHLHP12272 177 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 GTF2F2P13984 249 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 MNDAP41218 407 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 TNFAIP6P98066 277 aaPredicted RBP8.6□□□□□ -1.03
SMG1-208ENST00000563448 IFITM3Q01628 133 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 BAK1Q16611 211 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 SWI5Q1ZZU3 235 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 RTN4RL2Q86UN3 420 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 ZCCHC24Q8N2G6 241 aaKnown RBP8.6□□□□□ -1.03
SMG1-208ENST00000563448 OSR2Q8N2R0 312 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 MUC15Q8N387 334 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 FAM89BQ8N5H3 189 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 CELF2-AS1Q8N7Q2 184 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 OR51T1Q8NGJ9 327 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 CYYR1Q96J86 154 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 URM1Q9BTM9 101 aaKnown RBP8.6□□□□□ -1.03
SMG1-208ENST00000563448 IL19Q9UHD0 177 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 FLNCQ14315 2725 aa8.6□□□□□ -1.03
SMG1-208ENST00000563448 A0A0A6YYH2 397 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 A6NJ64 397 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 A6NNC1 897 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 M0R233 179 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 CHRM2P08172 466 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 ACAA1P09110 424 aaPredicted RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 PGA5P0DJD9 388 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 SRP9P49458 86 aaKnown RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 TMEM50BP56557 158 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 ERVK11-1P61568 191 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 PIGYQ3MUY2 71 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 WDR82Q6UXN9 313 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 FBXL14Q8N1E6 418 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 GDPD1Q8N9F7 314 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 OR10R2Q8NGX6 335 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 GCDHQ92947 438 aaPredicted RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 FBXW5Q969U6 566 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 PHF21AQ96BD5 680 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 MRPS24Q96EL2 167 aaKnown RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 PCDHB16Q9NRJ7 776 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 IL36RNQ9UBH0 155 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 ST3GAL6Q9Y274 331 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 POLDIP2Q9Y2S7 368 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 HRNRQ86YZ3 2850 aaPredicted RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 A6NLC8 198 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 CTDSPLO15194 276 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 AKR7A2O43488 359 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 NOS1APO75052 506 aaPredicted RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 CLDN1O95832 211 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 CD55P08174 381 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 CSF3P09919 207 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 PMELP40967 661 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 GATA4P43694 442 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 RBM11P57052 281 aaKnown RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 FGF12P61328 243 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 HOXA4Q00056 320 aaPredicted RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 PITPNAQ00169 270 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 DCTN2Q13561 401 aaKnown RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 TAF9Q16594 264 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 ZNF260Q3ZCT1 412 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 PLAC9Q5JTB6 97 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 RAB12Q6IQ22 244 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 POC1AQ8NBT0 407 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 OR56B1Q8NGI3 324 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms