RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 URM1Q9BTM9 101 aaKnown RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 ARRDC1-AS1Q9H2J1 176 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 NIPAL2Q9H841 368 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 SPANXB1Q9NS25 103 aaPredicted RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 CALML5Q9NZT1 146 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 TNFSF18Q9UNG2 199 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 TJP1Q07157 1748 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 MYH14Q7Z406 1995 aaKnown RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 A0A1W2PP11 408 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 LINC00862A6NCI5 91 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 CCDC182A6NF36 153 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 TCP10L2B9ZVM9 353 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 RHODO00212 210 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 HMGB3O15347 200 aaKnown RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 H1F0P07305 194 aaKnown RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 UBBP0CG47 229 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 ZNF250P15622 560 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 PSMB1P20618 241 aaKnown RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 HTR1DP28221 377 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 LOXP28300 417 aaPredicted RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 GALR1P47211 349 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 EMDP50402 254 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 COPZ1P61923 177 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SIX1Q15475 284 aaPredicted RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 LRRC37A5PQ49AS3 106 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 AWAT1Q58HT5 328 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 DNLZQ5SXM8 178 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 ZNF613Q6PF04 617 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 DCUN1D2Q6PH85 259 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 Q6ZVH6 145 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 C16orf82Q7Z2V1 217 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SERPINA11Q86U17 422 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 IFNEQ86WN2 208 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 UMODL1-AS1Q8N2C9 162 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 GATD1Q8NB37 220 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 OR1L8Q8NGR8 309 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 OR4C6Q8NH72 309 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 OR5R1Q8NH85 324 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SLC25A43Q8WUT9 341 aaPredicted RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 C1orf54Q8WWF1 131 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 MRPL24Q96A35 216 aaKnown RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 PPCDCQ96CD2 204 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SCMH1Q96GD3 660 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 REEP6Q96HR9 211 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 ZNF354BQ96LW1 612 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 MS4A4EQ96PG1 132 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 OR52B2Q96RD2 323 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 C20orf144Q9BQM9 153 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 MARVELD1Q9BSK0 173 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 HES7Q9BYE0 225 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SHARPINQ9H0F6 387 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 AAMDCQ9H7C9 122 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 ADGRL4Q9HBW9 690 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 RALYQ9UKM9 306 aaKnown RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 PCNTO95613 3336 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 DOCK2Q92608 1830 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 A0A087X0T9 212 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 LOC102724200A0A096LPH7 203 aaPredicted RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 A0A0G2JN53 185 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 I3L521 148 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 CCL25O15444 150 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 TRIAP1O43715 76 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 ATG12O94817 140 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 CCNE2O96020 404 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 OR13C7P0DN81 318 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 KDELR1P24390 212 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SNRPNP63162 240 aaKnown RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 GAGE2BQ13066 116 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 LTC4SQ16873 150 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 TIGITQ495A1 244 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 GAGE2EQ4V326 116 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 CYBRD1Q53TN4 286 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 FAM27D1Q5T7N8 215 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 HIST2H3PS2Q5TEC6 136 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 GAGE2AQ6NT46 116 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 DLK2Q6UY11 383 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 OR4N5Q8IXE1 308 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 OR13C6PQ8NH95 151 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 RAB2BQ8WUD1 216 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 ZMYND19Q96E35 227 aaPredicted RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 CNBD2Q96M20 576 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 EFCAB11Q9BUY7 163 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SDCBP2Q9H190 292 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 FAM96AQ9H5X1 160 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 CXorf21Q9HAI6 301 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 NRN1Q9NPD7 142 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 GAGE2DQ9UEU5 116 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 HSPB8Q9UJY1 196 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 NUDT5Q9UKK9 219 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 POMPQ9Y244 141 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SIPA1L1O43166 1804 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 A0A096LPK6 155 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 UBE2QL1A1L167 161 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 FAM166BA8MTA8 275 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 VWC2LB2RUY7 222 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 TAAR5O14804 337 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 SYNGR1O43759 233 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 GGCTO75223 188 aaKnown RBP4.05□□□□□ -1.76
SMG1-207ENST00000563235 PIAS1O75925 651 aa4.05□□□□□ -1.76
SMG1-207ENST00000563235 CDS2O95674 445 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms