RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ZNF529Q6P280 563 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
USB1-208ENST00000563207 SPICQ8N5J4 248 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 PHYHIPQ92561 330 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 TAF15Q92804 592 aaKnown RBP eCLIP13.06□□□□□ -0.32
USB1-208ENST00000563207 OPALINQ96PE5 141 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 DUX5Q96PT3 197 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 ZNF696Q9H7X3 374 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 PATZ1Q9HBE1 687 aaKnown RBP13.06□□□□□ -0.32
USB1-208ENST00000563207 FOXJ3Q9UPW0 622 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 PPIAL4AQ9Y536 164 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 TRBV5-7A0A0A0MS05 114 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 TRAV38-1A0A0B4J264 116 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 IGKV1-9A0A0C4DH69 117 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 FAM230AA0A1W2PPH8 454 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 SRRM5B3KS81 715 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 J3QLI3 93 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 J3QT63 122 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 MAGEB3O15480 346 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 NDUFA2O43678 99 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 ALDOBP05062 364 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 FSTP19883 344 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 MPZP25189 248 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 GABRA5P31644 462 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 MTCP1P56278 107 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 PPP3R1P63098 170 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 IL24Q13007 206 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 ARMCX4Q5H9R4 360 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 HAGHLQ6PII5 290 aaPredicted RBP13.05□□□□□ -0.32
USB1-208ENST00000563207 UNQ9370/PRO34162Q6UXP9 181 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 ZNF826PQ6ZT77 177 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 GCSAMQ8N6F7 178 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 TSPAN14Q8NG11 270 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 OR13C9Q8NGT0 318 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 NANPQ8TBE9 248 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 AQP3Q92482 292 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 RPL3LQ92901 407 aaKnown RBP13.05□□□□□ -0.32
USB1-208ENST00000563207 OR14A2Q96R54 314 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 VCX3AQ9NNX9 186 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 RASL12Q9NYN1 266 aa13.05□□□□□ -0.32
USB1-208ENST00000563207 IGHV3OR16-10A0A075B7F0 116 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 LGALS8O00214 317 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 NOS1APO75052 506 aaPredicted RBP13.04□□□□□ -0.32
USB1-208ENST00000563207 SC5DO75845 299 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 MUC1P15941 1255 aaPredicted RBP13.04□□□□□ -0.32
USB1-208ENST00000563207 IGFBP3P17936 291 aaPredicted RBP13.04□□□□□ -0.32
USB1-208ENST00000563207 ACSM3Q53FZ2 586 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 USP43Q70EL4 1123 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 C19orf18Q8NEA5 215 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 OR13C5Q8NGS8 318 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 TRMT10AQ8TBZ6 339 aaKnown RBP13.04□□□□□ -0.32
USB1-208ENST00000563207 FAM216AQ8WUB2 273 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 LRRC29Q8WV35 223 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 C12orf43Q96C57 262 aaKnown RBP13.04□□□□□ -0.32
USB1-208ENST00000563207 DERL3Q96Q80 235 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 TMED9Q9BVK6 235 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 TMEM165Q9HC07 324 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 TMEM138Q9NPI0 162 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 ZNF69Q9UC07 566 aa13.04□□□□□ -0.32
USB1-208ENST00000563207 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 OOEPA6NGQ2 149 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 F5H0A9 414 aaPredicted RBP13.03□□□□□ -0.32
USB1-208ENST00000563207 CCRL2O00421 344 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 CYB5AP00167 134 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 HCKP08631 526 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 GALP22466 123 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 TGFBR2P37173 567 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 MICBQ29980 383 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 ZNF404Q494X3 552 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 DMRTC1Q5HYR2 192 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 SYT6Q5T7P8 510 aaPredicted RBP13.03□□□□□ -0.32
USB1-208ENST00000563207 TEX36Q5VZQ5 186 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 CDH26Q8IXH8 852 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 MKXQ8IYA7 352 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 BPIFB2Q8N4F0 458 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 SIGLECL1Q8N7X8 197 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 NPRL2Q8WTW4 380 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 ZFAND2BQ8WV99 257 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 GCDHQ92947 438 aaPredicted RBP13.03□□□□□ -0.32
USB1-208ENST00000563207 C1orf147Q96MC9 270 aaPredicted RBP13.03□□□□□ -0.32
USB1-208ENST00000563207 ZNF48Q96MX3 618 aaPredicted RBP13.03□□□□□ -0.32
USB1-208ENST00000563207 RHOFQ9HBH0 211 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 NDUFB11Q9NX14 153 aa13.03□□□□□ -0.32
USB1-208ENST00000563207 SF3B6Q9Y3B4 125 aaKnown RBP13.03□□□□□ -0.32
USB1-208ENST00000563207 DOCK11Q5JSL3 2073 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 IGKV1-27A0A075B6S5 117 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 MEGF11A6BM72 1044 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 CEACAM18A8MTB9 384 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 FOXH1O75593 365 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 ARL6IP5O75915 188 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 PGA5P0DJD9 388 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 PSMB9P28065 219 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 BDKRB2P30411 391 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 CD80P33681 288 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 KISS1Q15726 138 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 CEACAM19Q7Z692 300 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 FAM90A1Q86YD7 464 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 CALHM1Q8IU99 346 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 Q8IYB0 196 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms