RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CDK5Q00535 292 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 BCL2L15Q5TBC7 163 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 NDUFA11Q86Y39 141 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 ZNF679Q8IYX0 411 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 ADGRG5Q8IZF4 528 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 HS3ST5Q8IZT8 346 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 C11orf42Q8N5U0 333 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 OR8B4Q96RC9 309 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 CITED2Q99967 270 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-202ENST00000562722 NRIP2Q9BQI9 281 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 PRSS22Q9GZN4 317 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 NECAP2Q9NVZ3 263 aa10.5□□□□□ -0.73
SF3B3-202ENST00000562722 TBL2Q9Y4P3 447 aaKnown RBP10.5□□□□□ -0.73
SF3B3-202ENST00000562722 A0A1W2PRX2 142 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 PQLC2LA1A4F0 135 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 A6NIN4 97 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 VGLL3A8MV65 326 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 PRR32B1ATL7 298 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 LOC110117498-PIK3R3F6TDL0 507 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 ANXA8P13928 327 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 PRKACGP22612 351 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 OR12D2P58182 307 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 ROM1Q03395 351 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 GDPD3Q7L5L3 318 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 CALHM1Q8IU99 346 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 TRMT10AQ8TBZ6 339 aaKnown RBP10.49□□□□□ -0.73
SF3B3-202ENST00000562722 CNN2Q99439 309 aaKnown RBP10.49□□□□□ -0.73
SF3B3-202ENST00000562722 CDCA4Q9BXL8 241 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 MOB1AQ9H8S9 216 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 SERTAD4Q9NUC0 356 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 COPS3Q9UNS2 423 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 SLC22A13Q9Y226 551 aa10.49□□□□□ -0.73
SF3B3-202ENST00000562722 FAM230AA0A1W2PPH8 454 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 A6NDX4 124 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 CCDC182A6NF36 153 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 FAM90A8PA6NJQ4 464 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 DLGAP1O14490 977 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 NOS1APO75052 506 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-202ENST00000562722 INMTO95050 263 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 IGLV3-1P01715 115 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 TTRP02766 147 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 ALDOBP05062 364 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 ZNF728P0DKX0 622 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 CALB2P22676 271 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 VDAC2P45880 294 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-202ENST00000562722 ACTR3P61158 418 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 COL10A1Q03692 680 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 SLC34A1Q06495 639 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 EDDM3AQ14507 147 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 ZNF322Q6U7Q0 402 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-202ENST00000562722 CCBE1Q6UXH8 406 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-202ENST00000562722 PLEKHG7Q6ZR37 379 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 ANGPTL5Q86XS5 388 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 Q8N2B8 174 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 CANT1Q8WVQ1 401 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 PHF21AQ96BD5 680 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 MALSU1Q96EH3 234 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 APOL4Q9BPW4 351 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 PLEKHA1Q9HB21 404 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 SLC25A19Q9HC21 320 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-202ENST00000562722 SLC7A11Q9UPY5 501 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 HILPDAQ9Y5L2 63 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 R4GMQ9 66 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 PLXNB1O43157 2135 aa10.48□□□□□ -0.73
SF3B3-202ENST00000562722 MEGF11A6BM72 1044 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 C17orf98A8MV24 154 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 ODF3BA8MYP8 253 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 H3BUI4 141 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 K7N7A8 449 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 MAGEB4O15481 346 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-202ENST00000562722 ATP8B1O43520 1251 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 IGHV1-8P0DP01 117 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 CD33P20138 364 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 DLX6P56179 175 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 CXCR4P61073 352 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 ODF4Q2M2E3 257 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 ZNF626Q68DY1 528 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 SPATA24Q86W54 205 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 NDNFQ8TB73 568 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 ZNF714Q96N38 554 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 THTPAQ9BU02 230 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 PRRG3Q9BZD7 231 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 HES4Q9HCC6 221 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 PAPOLBQ9NRJ5 636 aaKnown RBP10.47□□□□□ -0.73
SF3B3-202ENST00000562722 H2AFY2Q9P0M6 372 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-202ENST00000562722 OR52A1Q9UKL2 312 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 SNX5Q9Y5X3 404 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 V9GYS6 101 aa10.47□□□□□ -0.73
SF3B3-202ENST00000562722 AQP12BA6NM10 295 aa10.46□□□□□ -0.73
SF3B3-202ENST00000562722 ZNF670-ZNF695F2Z2N8 137 aa10.46□□□□□ -0.73
SF3B3-202ENST00000562722 H3BSH0 61 aa10.46□□□□□ -0.73
SF3B3-202ENST00000562722 DNAJC8O75937 253 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-202ENST00000562722 RPP14O95059 124 aaKnown RBP10.46□□□□□ -0.73
SF3B3-202ENST00000562722 RBP4P02753 201 aa10.46□□□□□ -0.73
SF3B3-202ENST00000562722 CHRM2P08172 466 aa10.46□□□□□ -0.73
SF3B3-202ENST00000562722 PF4V1P10720 104 aa10.46□□□□□ -0.73
SF3B3-202ENST00000562722 HOXB6P17509 224 aaKnown RBP10.46□□□□□ -0.73
SF3B3-202ENST00000562722 MPZP25189 248 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms