RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 KCNK17Q96T54 332 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SLIRPQ9GZT3 109 aaKnown RBP6.67□□□□□ -1.34
TCF4-216ENST00000562680 ACKR4Q9NPB9 350 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 NECAP2Q9NVZ3 263 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OR14J1Q9UGF5 321 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 M0R1B8 84 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 AP4M1O00189 453 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SPINT2O43291 252 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 XRCC3O43542 346 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OR2B8PP59922 312 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 IL13RA1P78552 427 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 MSMO1Q15800 293 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 PET117Q6UWS5 81 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 WFDC8Q8IUA0 241 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 ZNF695Q8IW36 515 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 FADS6Q8N9I5 356 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OR13C5Q8NGS8 318 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OR13G1Q8NGZ3 307 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 TINAGQ9UJW2 476 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 FLVCR1Q9Y5Y0 555 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 F5H5P2 479 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 LGALS8O00214 317 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 TFP02787 698 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SELLP14151 372 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 GABRA2P47869 451 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 CRYBA2P53672 197 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SMIM21Q3B7S5 101 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 ZNF774Q6NX45 483 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 TMEM88Q6PEY1 159 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 LYPD4Q6UWN0 246 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SLC16A12Q6ZSM3 486 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 CCDC190Q86UF4 302 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 TUSC5Q8IXB3 177 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SMIM4Q8WVI0 70 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 RND1Q92730 232 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 NEUROG3Q9Y4Z2 214 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 ASXL3Q9C0F0 2248 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SELENOPP49908 381 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 FXYD4P59646 89 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 ETFDHQ16134 617 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 KANSL1Q7Z3B3 1105 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 CATSPERDQ86XM0 798 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 SIAH3Q8IW03 269 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 ZNF2Q9BSG1 426 aaPredicted RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 SLC25A32Q9H2D1 315 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 SMLR1H3BR10 107 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 MT-ND4P03905 459 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 SNRNP70P08621 437 aaKnown RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 RFX2P48378 723 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 LRRC37A5PQ49AS3 106 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 SLC25A47Q6Q0C1 308 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 LINC00114Q6XXX2 140 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 MOB1BQ7L9L4 216 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 TNFRSF14Q92956 283 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 UCN2Q96RP3 112 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 MRPS18BQ9Y676 258 aaKnown RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 TMEM200CA6NKL6 621 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 F5H0A9 414 aaPredicted RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 TCRBP04435 133 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 FAHP16930 419 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 IL3RAP26951 378 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 FCN2Q15485 313 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 CD163Q86VB7 1156 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 CMTM4Q8IZR5 234 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 PKIBQ9C010 78 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 RNF167Q9H6Y7 350 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 ZNF629Q9UEG4 869 aaPredicted RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 A0A0G2JMP0 313 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 A6NIN4 97 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 GPR137BO60478 399 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 KNG1P01042 644 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 GAAP10253 952 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 SPP1P10451 314 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 COX5BP10606 129 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 MGMTP16455 207 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 PPT1P50897 306 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 FOXL2P58012 376 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 LSM11P83369 360 aaKnown RBP eCLIP6.66□□□□□ -1.34
TCF4-216ENST00000562680 MFGE8Q08431 387 aaPredicted RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 UQCC3Q6UW78 93 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 HIST2H3AQ71DI3 136 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 FAM214BQ7L5A3 538 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 OVCH2Q7RTZ1 564 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 HSD17B13Q7Z5P4 300 aaPredicted RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 C20orf196Q8IYI0 205 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 GCNT2Q8N0V5 402 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 OSR2Q8N2R0 312 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 BMPERQ8N8U9 685 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 OR4M2Q8NGB6 313 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 ZNF519Q8TB69 540 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 SMAP2Q8WU79 429 aaPredicted RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 TMEM45BQ96B21 275 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 SCMH1Q96GD3 660 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 ST6GAL2Q96JF0 529 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 LRFN3Q9BTN0 628 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 OR2H1Q9GZK4 316 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 METTL17Q9H7H0 456 aaPredicted RBP6.66□□□□□ -1.34
TCF4-216ENST00000562680 DENND4CQ5VZ89 1909 aa6.66□□□□□ -1.34
TCF4-216ENST00000562680 IGLV1-36A0A0B4J1U3 117 aa6.65□□□□□ -1.34
TCF4-216ENST00000562680 TRAF3IP2O43734 574 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms