RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 RAMP3O60896 148 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 ACRP10323 421 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 HIST1H1CP16403 213 aaKnown RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 SPINK2P20155 84 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 ALOX5APP20292 161 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 FUT3P21217 361 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 RBMXP38159 391 aaKnown RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 CEACAM3P40198 252 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 CDKN2AP42771 156 aaKnown RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 EFNA3P52797 238 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 ELLP55199 621 aaPredicted RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 TPPP2P59282 170 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 EIF2B1Q14232 305 aaKnown RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 IAH1Q2TAA2 248 aaPredicted RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 ANKRD55Q3KP44 614 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 PRAMEF14Q5SWL7 426 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 C9orf135Q5VTT2 229 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 FAM90A2PQ658T7 463 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 PRSS57Q6UWY2 283 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 NUP43Q8NFH3 380 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 OR13C9Q8NGT0 318 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 OR2I1PQ8NGU4 316 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 GPR119Q8TDV5 335 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 ADAMTS18Q8TE60 1221 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 MBD3L1Q8WWY6 194 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 RPUSD4Q96CM3 377 aaKnown RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 ALG14Q96F25 216 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 SLC35A4Q96G79 324 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 GMPPAQ96IJ6 420 aaPredicted RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 ZNF514Q96K75 400 aaPredicted RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 LINC00615Q96LM1 132 aaPredicted RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 Q96M85 177 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 JSRP1Q96MG2 331 aaPredicted RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 CIB3Q96Q77 187 aaPredicted RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 RNF2Q99496 336 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 ABHD6Q9BV23 337 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 VAMP8Q9BV40 100 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 TPSD1Q9BZJ3 242 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 MTIF3Q9H2K0 278 aaKnown RBP6.39□□□□□ -1.39
CDH1-203ENST00000561751 ZNF576Q9H609 170 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 C20orf141Q9NUB4 165 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 SOHLH2Q9NX45 425 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 SMPXQ9UHP9 88 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 CES1P1Q9UKY3 287 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 B3GALT5Q9Y2C3 310 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 WDR45Q9Y484 360 aa6.39□□□□□ -1.39
CDH1-203ENST00000561751 TRIP12Q14669 1992 aaPredicted RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 A0A1W2PR48 441 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 MEIS3P1A6NDR6 274 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 A6NNC1 897 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 TMEM250H0YL14 139 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 SAP18O00422 153 aaKnown RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 SCDO00767 359 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 NDUFS4O43181 175 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 TMPRSS11DO60235 418 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 PITX3O75364 302 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 LEFTY1O75610 366 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 PIAS2O75928 621 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 B3GAT3O94766 335 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 NDUFB8O95169 186 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 VENTXO95231 258 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 IFNA1P01562 189 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 CTSDP07339 412 aaPredicted RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 OR5G3P0C626 314 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 GIMD1P0DJR0 217 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 SERPINA2P20848 420 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 AK4P27144 223 aaPredicted RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 PSMB5P28074 263 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 CEACAM8P31997 349 aaPredicted RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 SFTPDP35247 375 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 HRH1P35367 487 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 PPP1CCP36873 323 aaKnown RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 CAPZBP47756 277 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 SOX2P48431 317 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 CLDN6P56747 220 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 SNRPD1P62314 119 aaKnown RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 RPS4XP62701 263 aaKnown RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 BAXQ07812 192 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 DMWDQ09019 674 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 ENDOGQ14249 297 aaKnown RBP6.38□□□□□ -1.39
CDH1-203ENST00000561751 MPV17LQ2QL34 196 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 TPTE2P1Q5T6R2 138 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 SLC8B1Q6J4K2 584 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 MFSD12Q6NUT3 480 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 SLC48A1Q6P1K1 146 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 KCNIP4Q6PIL6 250 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 TMEM220Q6QAJ8 160 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 CYP2G1PQ6ZSU1 146 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 TMPRSS7Q7RTY8 843 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 ZNF550Q7Z398 422 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 KMT5CQ86Y97 462 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 NRSN1Q8IZ57 195 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 CFAP52Q8N1V2 620 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 RFLNBQ8N5W9 214 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 CYB561D1Q8N8Q1 229 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 OR4C5Q8NGB2 326 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 OR4S2Q8NH73 311 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 PFN4Q8NHR9 129 aa6.38□□□□□ -1.39
CDH1-203ENST00000561751 FAM213BQ8TBF2 198 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms