RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MPV17P39210 176 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 PMELP40967 661 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 CCR6P51684 374 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 TATDN3Q17R31 274 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 FAM76BQ5HYJ3 339 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 MYO7BQ6PIF6 2116 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 SPERTQ8NA61 448 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 NUDCD2Q8WVJ2 157 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 OR51I2Q9H344 312 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 PLK3Q9H4B4 646 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 NUDT15Q9NV35 164 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 MCUBQ9NWR8 336 aa14.64□□□□□ -0.07
HDDC3-206ENST00000561036 ELF5Q9UKW6 265 aaPredicted RBP14.64□□□□□ -0.07
HDDC3-206ENST00000561036 A0A1B0GWJ7 208 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 HMX3A6NHT5 357 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 TRAPPC2LH3BP13 241 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 J3QT63 122 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 RAB3DO95716 219 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 CD3DP04234 171 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 SFTPBP07988 381 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 CCKARP32238 428 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 RBM11P57052 281 aaKnown RBP14.63□□□□□ -0.07
HDDC3-206ENST00000561036 FGF12P61328 243 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 RPS23P62266 143 aaKnown RBP14.63□□□□□ -0.07
HDDC3-206ENST00000561036 ARFRP1Q13795 201 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 ACTBL2Q562R1 376 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 SFRP4Q6FHJ7 346 aaPredicted RBP14.63□□□□□ -0.07
HDDC3-206ENST00000561036 SEZ6L2Q6UXD5 910 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 ZNF782Q6ZMW2 699 aaPredicted RBP14.63□□□□□ -0.07
HDDC3-206ENST00000561036 FBXL14Q8N1E6 418 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 ADAT1Q9BUB4 502 aaKnown RBP14.63□□□□□ -0.07
HDDC3-206ENST00000561036 TMEM100Q9NV29 134 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 PLEKHJ1Q9NW61 149 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 NKIRAS2Q9NYR9 191 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 ST3GAL6Q9Y274 331 aa14.63□□□□□ -0.07
HDDC3-206ENST00000561036 A0A0B4J293 547 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 NDUFB6O95139 128 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 ACAA1P09110 424 aaPredicted RBP14.62□□□□□ -0.07
HDDC3-206ENST00000561036 GABRR1P24046 479 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 CHATP28329 748 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 GLRXP35754 106 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 MZT1Q08AG7 82 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 ZMYND11Q15326 602 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 OR8G1Q15617 311 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 TAF9Q16594 264 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 RGS7BPQ6MZT1 257 aaPredicted RBP14.62□□□□□ -0.07
HDDC3-206ENST00000561036 LINC00596Q86U02 117 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 C20orf85Q9H1P6 137 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 NPDC1Q9NQX5 325 aaPredicted RBP14.62□□□□□ -0.07
HDDC3-206ENST00000561036 PLEKHA6Q9Y2H5 1048 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 POLDIP2Q9Y2S7 368 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 ALG5Q9Y673 324 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 ZGRF1Q86YA3 2104 aa14.62□□□□□ -0.07
HDDC3-206ENST00000561036 TRAV6A0A075B6T7 132 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 C7orf66A4D0T2 115 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 DISC1C4P0D8 188 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 TIMM8AO60220 97 aaPredicted RBP14.61□□□□□ -0.07
HDDC3-206ENST00000561036 PRAF2O60831 178 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 PDCD6O75340 191 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 PEX14O75381 377 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 ZNF250P15622 560 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 BCL3P20749 454 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 PTAFRP25105 342 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 ASCL1P50553 236 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 MECP2P51608 486 aaKnown RBP14.61□□□□□ -0.07
HDDC3-206ENST00000561036 NKX6-1P78426 367 aaPredicted RBP14.61□□□□□ -0.07
HDDC3-206ENST00000561036 RBMS2Q15434 407 aaKnown RBP14.61□□□□□ -0.07
HDDC3-206ENST00000561036 ALKBH6Q3KRA9 238 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 SIGIRRQ6IA17 410 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 HAGHLQ6PII5 290 aaPredicted RBP14.61□□□□□ -0.07
HDDC3-206ENST00000561036 NCCRP1Q6ZVX7 275 aaPredicted RBP14.61□□□□□ -0.07
HDDC3-206ENST00000561036 AKAP14Q86UN6 197 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 Q8IYB0 196 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 OR13G1Q8NGZ3 307 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 DVL3Q92997 716 aaPredicted RBP14.61□□□□□ -0.07
HDDC3-206ENST00000561036 SLAMF9Q96A28 289 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 CHST6Q9GZX3 395 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 CXXC4Q9H2H0 198 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 MTCH1Q9NZJ7 389 aa14.61□□□□□ -0.07
HDDC3-206ENST00000561036 GEMIN2O14893 280 aaKnown RBP14.6□□□□□ -0.07
HDDC3-206ENST00000561036 HNRNPCP07910 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
HDDC3-206ENST00000561036 FUT3P21217 361 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 CD40P25942 277 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 NPBWR2P48146 333 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 MPV17LQ2QL34 196 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 C11orf91Q3C1V1 193 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 PIGYQ3MUY2 71 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 FBXL19-AS1Q494R0 122 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 RNASE10Q5GAN6 216 aaKnown RBP14.6□□□□□ -0.07
HDDC3-206ENST00000561036 TMEM108Q6UXF1 575 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 HOGA1Q86XE5 327 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 OR4D10Q8NGI6 311 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 EMG1Q92979 244 aaKnown RBP14.6□□□□□ -0.07
HDDC3-206ENST00000561036 PRRT1Q99946 306 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 SLC25A21Q9BQT8 299 aaPredicted RBP14.6□□□□□ -0.07
HDDC3-206ENST00000561036 SLC2A8Q9NY64 477 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 SCP2D1Q9UJQ7 156 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 CACNA1AO00555 2505 aa14.6□□□□□ -0.07
HDDC3-206ENST00000561036 SYNGR1O43759 233 aa14.59□□□□□ -0.07
HDDC3-206ENST00000561036 IGHV3-13P01766 116 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms