RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SDHAP31040 664 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 TGM4P49221 684 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 FXYD6P3P58550 94 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 VBP1P61758 197 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 NCS1P62166 190 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 LSM3P62310 102 aaKnown RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 EFNB1P98172 346 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 MICBQ29980 383 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 ZNF829Q3KNS6 432 aaPredicted RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 TIMM50Q3ZCQ8 353 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 KLHL22Q53GT1 634 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 WDR82Q6UXN9 313 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 LIAT1Q6ZQX7 453 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 Q6ZS46 218 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 SLC36A1Q7Z2H8 476 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 ADCK1Q86TW2 530 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 LINC00346Q8IVM7 164 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 SLC26A10Q8NG04 563 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 H1FXQ92522 213 aaKnown RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 LGALS12Q96DT0 336 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 GPX7Q96SL4 187 aaPredicted RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 DDOQ99489 341 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 ATF6BQ99941 703 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 MND1Q9BWT6 205 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 FAM234AQ9H0X4 552 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 METTL8Q9H825 291 aaKnown RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 PALMDQ9NP74 551 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 NRIP3Q9NQ35 241 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 MRPS18AQ9NVS2 196 aaKnown RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 MRPL15Q9P015 296 aaKnown RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 DIMT1Q9UNQ2 313 aaKnown RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 ERGIC3Q9Y282 383 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 LSM2Q9Y333 95 aaKnown RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 M0R135 149 aa8□□□□□ -1.13
TPM1-225ENST00000560679 MYL12BO14950 172 aa8□□□□□ -1.13
TPM1-225ENST00000560679 NDUFB3O43676 98 aa8□□□□□ -1.13
TPM1-225ENST00000560679 ANGPTL7O43827 346 aa8□□□□□ -1.13
TPM1-225ENST00000560679 CALRP27797 417 aaKnown RBP8□□□□□ -1.13
TPM1-225ENST00000560679 GRK5P34947 590 aa8□□□□□ -1.13
TPM1-225ENST00000560679 CDKN2AP42771 156 aaKnown RBP8□□□□□ -1.13
TPM1-225ENST00000560679 RAB40BQ12829 278 aa8□□□□□ -1.13
TPM1-225ENST00000560679 GLYATL3Q5SZD4 288 aa8□□□□□ -1.13
TPM1-225ENST00000560679 RPL13AP3Q6NVV1 102 aa8□□□□□ -1.13
TPM1-225ENST00000560679 BCDIN3DQ7Z5W3 292 aaKnown RBP8□□□□□ -1.13
TPM1-225ENST00000560679 PROKR2Q8NFJ6 384 aa8□□□□□ -1.13
TPM1-225ENST00000560679 OR2T33Q8NG76 320 aa8□□□□□ -1.13
TPM1-225ENST00000560679 OR56B2PQ8NGI1 322 aa8□□□□□ -1.13
TPM1-225ENST00000560679 OR52I1Q8NGK6 324 aa8□□□□□ -1.13
TPM1-225ENST00000560679 OR4Q3Q8NH05 313 aa8□□□□□ -1.13
TPM1-225ENST00000560679 FANK1Q8TC84 345 aa8□□□□□ -1.13
TPM1-225ENST00000560679 ZNF799Q96GE5 643 aa8□□□□□ -1.13
TPM1-225ENST00000560679 RCC1LQ96I51 464 aaKnown RBP8□□□□□ -1.13
TPM1-225ENST00000560679 OPALINQ96PE5 141 aa8□□□□□ -1.13
TPM1-225ENST00000560679 GAFA1Q96PS6 74 aa8□□□□□ -1.13
TPM1-225ENST00000560679 OR5M11Q96RB7 305 aa8□□□□□ -1.13
TPM1-225ENST00000560679 MGLLQ99685 303 aa8□□□□□ -1.13
TPM1-225ENST00000560679 DCSTAMPQ9H295 470 aa8□□□□□ -1.13
TPM1-225ENST00000560679 FGF20Q9NP95 211 aaPredicted RBP8□□□□□ -1.13
TPM1-225ENST00000560679 IL20Q9NYY1 176 aa8□□□□□ -1.13
TPM1-225ENST00000560679 CCDC59Q9P031 241 aaKnown RBP8□□□□□ -1.13
TPM1-225ENST00000560679 SIGLEC7Q9Y286 467 aa8□□□□□ -1.13
TPM1-225ENST00000560679 A0A1B0GVG6 124 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 GGT3PA6NGU5 568 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 CCRL2O00421 344 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 BHLHE40O14503 412 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 HSMCR30P0CW71 290 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 PF4V1P10720 104 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 PSKH1P11801 424 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 OTX1P32242 354 aaPredicted RBP7.99□□□□□ -1.13
TPM1-225ENST00000560679 OPRL1P41146 370 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 CD83Q01151 205 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 ECH1Q13011 328 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 ZNF846Q147U1 533 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 MED22Q15528 200 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 LRRC10Q5BKY1 277 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 TCTEX1D4Q5JR98 221 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 NKAPLQ5M9Q1 402 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 ATPAF1Q5TC12 328 aaPredicted RBP7.99□□□□□ -1.13
TPM1-225ENST00000560679 AADACL4Q5VUY2 407 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 GPR139Q6DWJ6 353 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 TMPRSS11FQ6ZWK6 438 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 ZBTB46Q86UZ6 589 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 DYNAPQ8N1N2 210 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 LNX2Q8N448 690 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 NANOGP1Q8N7R0 232 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 OR5T2Q8NGG2 359 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 OR52L1Q8NGH7 329 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 OR6Q1Q8NGQ2 317 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 S100ZQ8WXG8 99 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 RFKQ969G6 155 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 RNFT2Q96EX2 444 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 MAP6Q96JE9 813 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 WDR12Q9GZL7 423 aaKnown RBP7.99□□□□□ -1.13
TPM1-225ENST00000560679 WDR13Q9H1Z4 485 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 OR52D1Q9H346 318 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 PPP1R3EQ9H7J1 279 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 ELL3Q9HB65 397 aaPredicted RBP7.99□□□□□ -1.13
TPM1-225ENST00000560679 HMG20AQ9NP66 347 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 AKIP1Q9NQ31 210 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 INPP5EQ9NRR6 644 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 878.2 ms