RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 GATAD2BQ8WXI9 593 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 GCDHQ92947 438 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZDHHC16Q969W1 377 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 SLAMF9Q96A28 289 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 DCTN5Q9BTE1 182 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 DCLRE1BQ9H816 532 aa10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 ELL3Q9HB65 397 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 CHCHD3Q9NX63 227 aaKnown RBP10.72□□□□□ -0.69
CTDSPL2-209ENST00000560620 TRBV2A0A0J9YWF9 115 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 TMEM212A6NML5 194 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 CCDC159P0C7I6 412 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 PRKACBP22694 351 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 AZGP1P25311 298 aaKnown RBP10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 PRDX2P32119 198 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 CAPGP40121 348 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 CAV3P56539 151 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 OGFRL1Q5TC84 451 aaPredicted RBP10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 RUSC1-AS1Q66K80 236 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 VMO1Q7Z5L0 202 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 C8orf59Q8N0T1 100 aaPredicted RBP10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 FAM185AQ8N0U4 392 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 ZNF561Q8N587 486 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 ASCC1Q8N9N2 400 aaKnown RBP10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 OR51A4Q8NGJ6 313 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 OR10AC1Q8NH08 325 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 CEP19Q96LK0 163 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 TBX15Q96SF7 602 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 PDCD1LG2Q9BQ51 273 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 NRIP2Q9BQI9 281 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 PKIBQ9C010 78 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 SIRPDQ9H106 197 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 NEK6Q9HC98 313 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 ESM1Q9NQ30 184 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 SIRT7Q9NRC8 400 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 MRPS18AQ9NVS2 196 aaKnown RBP10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 DHDHQ9UQ10 334 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 SOX21Q9Y651 276 aaPredicted RBP10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 KPTNQ9Y664 436 aa10.71□□□□□ -0.69
CTDSPL2-209ENST00000560620 DNHD1Q96M86 4753 aa10.71□□□□□ -0.7
CTDSPL2-209ENST00000560620 IGKV1-27A0A075B6S5 117 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 CENPVL3A0A0U1RRI6 287 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 MDFIC2A0A1B0GVS7 189 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 DNAJC9-AS1A6NH13 148 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 OR4C45A6NMZ5 311 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 E9PI62 339 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 NOS1APO75052 506 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 ZFPL1O95159 310 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 RPSAP08865 295 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 MMP9P14780 707 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 ATF1P18846 271 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 MPZP25189 248 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 DCKP27707 260 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 ETV1P50549 477 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 BPIFB3P59826 476 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 UBA52P62987 128 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 ADARB1P78563 741 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 IL18R1Q13478 541 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 BLMHQ13867 455 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 C12orf54Q6X4T0 127 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 EGFL6Q8IUX8 553 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 MKXQ8IYA7 352 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 CD177Q8N6Q3 437 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 ZDHHC22Q8N966 263 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 OR13C9Q8NGT0 318 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 HAVCR2Q8TDQ0 301 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 FAM216AQ8WUB2 273 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 SLC25A28Q96A46 364 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 RFT1Q96AA3 541 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 ZNF48Q96MX3 618 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 FGF20Q9NP95 211 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 TNFRSF19Q9NS68 423 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 MTCH1Q9NZJ7 389 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 MAB21L2Q9Y586 359 aa10.7□□□□□ -0.7
CTDSPL2-209ENST00000560620 IGHV1-69DA0A0B4J2H0 117 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 H0YAE9 185 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 HAX1O00165 279 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 CASQ2O14958 399 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 KNG1P01042 644 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 IGHV1-69P01742 117 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 HCKP08631 526 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 GNAO1P09471 354 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 LIMS3P0CW19 117 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 LIMS4P0CW20 117 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 PRTN3P24158 256 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 GTF2A1P52655 376 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 SNU13P55769 128 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 PRB3Q04118 309 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 DEFB112Q30KQ8 113 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 OR2G6Q5TZ20 316 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 FIP1L1Q6UN15 594 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 LHFPL2Q6ZUX7 228 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 C9orf139Q6ZV77 190 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 UTS2BQ765I0 119 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 SERPINA12Q8IW75 414 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 LY6G5BQ8NDX9 201 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 DNAAF1Q8NEP3 725 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 OR5D14Q8NGL3 314 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 EMG1Q92979 244 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms