RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 MAP2K3P46734 347 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 CBX1P83916 185 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 ABCA11PQ4W5N1 156 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 LINC01590Q5TEZ4 76 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 KCTD18Q6PI47 426 aaPredicted RBP14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 OR5A2Q8NGI9 324 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 OR4Q3Q8NH05 313 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 TFAP2CQ92754 450 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 ASB9Q96DX5 294 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 OR14J1Q9UGF5 321 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 NXPH2O95156 264 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 IGHV1-8P0DP01 117 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 CLUP10909 449 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 JUNBP17275 347 aaPredicted RBP14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 OPRL1P41146 370 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 CEBPDP49716 269 aaPredicted RBP14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 ARHGDIBP52566 201 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 EDDM3BP56851 147 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 LDLRAD2Q5SZI1 272 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 MOB3CQ70IA8 216 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 POC1AQ8NBT0 407 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 ITFG2Q969R8 447 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 LRGUKQ96M69 825 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 LIN7BQ9HAP6 207 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 U3KQV3 271 aa14.23□□□□□ -0.13
TSPAN3-208ENST00000560514 FAM90A22PA8MWA6 464 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 H0YHG0 523 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 DNAJC8O75937 253 aaPredicted RBP14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 FAM107AO95990 144 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 T-ENOLP0DO92 83 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 GSTT1P30711 240 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 THBS3P49746 956 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 DLX6P56179 175 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 ACTA2P62736 377 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 ACTG2P63267 376 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 ACTC1P68032 377 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 ACTA1P68133 377 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 PPP1R8Q12972 351 aaKnown RBP14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 C9orf152Q5JTZ5 239 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 CASC10Q5T4H9 136 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 PLCXD3Q63HM9 321 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 COMMD2Q86X83 199 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 ASCC1Q8N9N2 400 aaKnown RBP14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 CCDC197Q8NCU1 140 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 OR10G2Q8NGC3 310 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 MUC7Q8TAX7 377 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 GIPC3Q8TF64 312 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 OTULINQ96BN8 352 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 LYZL4Q96KX0 146 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 ZNF488Q96MN9 340 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 FEVQ99581 238 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 ARMC1Q9NVT9 282 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 POLDIP2Q9Y2S7 368 aa14.22□□□□□ -0.13
TSPAN3-208ENST00000560514 MEX3AA1L020 520 aaKnown RBP14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 AQP12BA6NM10 295 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 NUDT19A8MXV4 375 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 GSC2O15499 205 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 HMGN1P05114 100 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 BRS3P32247 399 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 C10orf99Q6UWK7 81 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 ZBTB49Q6ZSB9 765 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 GDPD3Q7L5L3 318 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 AQP12AQ8IXF9 295 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 ZNF454Q8N9F8 522 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 OR8B12Q8NGG6 310 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 TEX47Q8TBZ9 253 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 THEM6Q8WUY1 208 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 ZNF714Q96N38 554 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 AMELYQ99218 206 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 ASCL2Q99929 193 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 SLC25A33Q9BSK2 321 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 VNN3Q9NY84 501 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 TAS2R1Q9NYW7 299 aa14.21□□□□□ -0.13
TSPAN3-208ENST00000560514 PSMB11A5LHX3 300 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 SOX14O95416 240 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 CST1P01037 141 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 LYNP07948 512 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 PGA5P0DJD9 388 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 HTR1DP28221 377 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 ETV3LQ6ZN32 361 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 ZNF573Q86YE8 665 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 OSR2Q8N2R0 312 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 ZNF676Q8N7Q3 588 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 Q8NFD4 153 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 BCAS4Q8TDM0 211 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 OR8B4Q96RC9 309 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 NIPSNAP1Q9BPW8 284 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 NIPAL2Q9H841 368 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 BIRC6Q9NR09 4857 aa14.2□□□□□ -0.14
TSPAN3-208ENST00000560514 DSCAML1Q8TD84 2053 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 RYR2Q92736 4967 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 J3QT63 122 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 K7N7A8 449 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 CD24P25063 80 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 SLC6A1P30531 599 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 MYCNOSP40205 109 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 HAAOP46952 286 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 GP2P55259 537 aaKnown RBP14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 PSMA6P60900 246 aaKnown RBP14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 RIPPLY1Q0D2K3 151 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms