RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RAB12Q6IQ22 244 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 C5orf46Q6UWT4 87 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 SLC35D2Q76EJ3 337 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 DEFB125Q8N687 156 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 OR11H6Q8NGC7 330 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 OR4M1Q8NGD0 313 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 OR5T2Q8NGG2 359 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 OR5AK3PQ8NH89 298 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 BBS10Q8TAM1 723 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 UBALD1Q8TB05 177 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 SFXN5Q8TD22 340 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 IFT81Q8WYA0 676 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 SEH1LQ96EE3 360 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 METTL2AQ96IZ6 378 aaKnown RBP4.79□□□□□ -1.64
HERC1-208ENST00000560462 UBE2E2Q96LR5 201 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 TMEM237Q96Q45 408 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 MRPL57Q9BQC6 102 aaKnown RBP4.79□□□□□ -1.64
HERC1-208ENST00000560462 TSPYL1Q9H0U9 437 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 DNTTIP1Q9H147 329 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 SLA2Q9H6Q3 261 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 GNB4Q9HAV0 340 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 C19orf12Q9NSK7 152 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 ATAD3AQ9NVI7 634 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 USE1Q9NZ43 259 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 ZNF225Q9UK10 706 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 MYRFQ9Y2G1 1151 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 NOP16Q9Y3C1 178 aaKnown RBP4.79□□□□□ -1.64
HERC1-208ENST00000560462 RAP2CQ9Y3L5 183 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 AGRNO00468 2067 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 PKHD1L1Q86WI1 4243 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 TRAV36DV7A0A075B6V5 113 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 C11orf98E9PRG8 122 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.78□□□□□ -1.64
HERC1-208ENST00000560462 SLC33A1O00400 549 aaPredicted RBP4.78□□□□□ -1.64
HERC1-208ENST00000560462 PLPP3O14495 311 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 VCYO14598 125 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 ABHD2P08910 425 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 COX5BP10606 129 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 TAC1P20366 129 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 CA6P23280 308 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 GCAP28676 217 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 ARHGDIBP52566 201 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 HPCAP84074 193 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 FOXI1Q12951 378 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 MELKQ14680 651 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 HIST3H3Q16695 136 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 ENTPD8Q5MY95 495 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 FAM27BQ5VT28 67 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 LCN12Q6JVE5 192 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 ARL6IP6Q8N6S5 226 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 MNS1Q8NEH6 495 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 PSMA8Q8TAA3 256 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 C11orf45Q8TAV5 145 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 LRRC29Q8WV35 223 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 ROPN1LQ96C74 230 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 GAFA1Q96PS6 74 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 INTS14Q96SY0 518 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 ADAT1Q9BUB4 502 aaKnown RBP4.78□□□□□ -1.64
HERC1-208ENST00000560462 NDEL1Q9GZM8 345 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 SLCO1B3Q9NPD5 702 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 SPAG4Q9NPE6 437 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 MRPL39Q9NYK5 338 aaKnown RBP4.78□□□□□ -1.64
HERC1-208ENST00000560462 TMEM216Q9P0N5 145 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 OR14J1Q9UGF5 321 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 VSIG4Q9Y279 399 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 TP53TG1Q9Y2A0 90 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 KCNK7Q9Y2U2 307 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 WSB1Q9Y6I7 421 aa4.78□□□□□ -1.64
HERC1-208ENST00000560462 CGB1A6NKQ9 187 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 LINC01619G3V211 115 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 SIGLEC5O15389 551 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 RIPK2O43353 540 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 GMDSO60547 372 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 SEC22BO75396 215 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 B3GALNT1O75752 331 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 GAS8-AS1O95177 125 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 IGHG4P01861 327 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 CST2P09228 141 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 ZNF823P16415 610 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 CCL3L1P16619 93 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 PSMB8P28062 276 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 LAP3P28838 519 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 SPIBQ01892 262 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 CBX3Q13185 183 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 SMN1Q16637 294 aaKnown RBP4.77□□□□□ -1.65
HERC1-208ENST00000560462 IMPG1Q17R60 797 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 VWC2Q2TAL6 325 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 FAM98BQ52LJ0 330 aaKnown RBP4.77□□□□□ -1.65
HERC1-208ENST00000560462 GPAT3Q53EU6 434 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 UNC50Q53HI1 259 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 ZNF678Q5SXM1 525 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 C10orf128Q5T292 105 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 FAM91A1Q658Y4 838 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 ZNF788Q6ZQV5 615 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 GPRIN3Q6ZVF9 776 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 KCTD8Q6ZWB6 473 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 C5orf56Q8N8D9 126 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 TEX45Q8NA69 505 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 TMEM163Q8TC26 289 aa4.77□□□□□ -1.65
HERC1-208ENST00000560462 MYOZ3Q8TDC0 251 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms