RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 NPDC1Q9NQX5 325 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ELF5Q9UKW6 265 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 NUP50Q9UKX7 468 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 SLC7A11Q9UPY5 501 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 HSPB11Q9Y547 144 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ARFGEF3Q5TH69 2177 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 FASNP49327 2511 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ZNF732B4DXR9 585 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ABCD4O14678 606 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 XRCC3O43542 346 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 PPP3CBP16298 524 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ATP1B3P54709 279 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 BTG1P62324 171 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ZNF718Q3SXZ3 478 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 RGS7BPQ6MZT1 257 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 DMRTC2Q8IXT2 367 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ZNF843Q8N446 348 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ACBD4Q8NC06 268 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 OR5A2Q8NGI9 324 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 RADILQ96JH8 1075 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 ZNF581Q9P0T4 197 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 RAB22AQ9UL26 194 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 SPEF1Q9Y4P9 236 aa12.18□□□□□ -0.46
RABGGTA-209ENST00000559551 GCN1Q92616 2671 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 BAHCC1Q9P281 2608 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 A0A1B0GWJ7 208 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 LEUTXA8MZ59 168 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 F8VVB4 439 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 F8VWA3 439 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 MPIG6BO95866 241 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 SFTPBP07988 381 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 TMEM225BP0DP42 221 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 SELEP16581 610 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 TUBG1P23258 451 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 PTAFRP25105 342 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 MNDAP41218 407 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 RNASE12Q5GAN4 147 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 TMEM69Q5SWH9 247 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 LAMTOR1Q6IAA8 161 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 VHLLQ6RSH7 139 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 TMEM108Q6UXF1 575 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 OR2W3Q7Z3T1 314 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 BATF2Q8N1L9 274 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 ZNF611Q8N823 705 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 PNLDC1Q8NA58 520 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 OR8G5Q8NG78 346 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 HS3ST6Q96QI5 342 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 MSL2Q9HCI7 577 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 KCNJ16Q9NPI9 418 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 TUBG2Q9NRH3 451 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 MCUBQ9NWR8 336 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 FOXI3A8MTJ6 420 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 AKR7A2O43488 359 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 SYNGR1O43759 233 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 SERPINA2P20848 420 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 RBMXP38159 391 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 HAAOP46952 286 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 NPBWR2P48146 333 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 IKZF1Q13422 519 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 FTMTQ8N4E7 242 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 OR10AD1Q8NGE0 317 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 YIPF5Q969M3 257 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 MRPL37Q9BZE1 423 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 NLKQ9UBE8 527 aa12.17□□□□□ -0.46
RABGGTA-209ENST00000559551 MYO18BQ8IUG5 2567 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 IGLV3-9A0A075B6K5 115 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 TRAV18A0A075B6X5 111 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 INMT-MINDY4F8WBC2 141 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 SOCS1O15524 211 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 IGHV3-13P01766 116 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 UBBP0CG47 229 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 MGMTP16455 207 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 TMEM50BP56557 158 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 RPS27AP62979 156 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 FAM76BQ5HYJ3 339 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 NCMAPQ5T1S8 102 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 UNQ6126/PRO20091Q6UXV3 157 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 DNM1P46Q6ZS02 220 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 SLC25A26Q70HW3 274 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 SLC38A6Q8IZM9 456 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 NUP37Q8NFH4 326 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 KCNG3Q8TAE7 436 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 NEUROG1Q92886 237 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 UPRTQ96BW1 309 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 SYT3Q9BQG1 590 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 ADAT1Q9BUB4 502 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 OR51I2Q9H344 312 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 ZMAT3Q9HA38 289 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 MTCH1Q9NZJ7 389 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 PRELID1Q9Y255 219 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 LRBAP50851 2863 aa12.16□□□□□ -0.46
RABGGTA-209ENST00000559551 IGHV3-64DA0A0J9YX35 117 aa12.15□□□□□ -0.46
RABGGTA-209ENST00000559551 SHISA9B4DS77 424 aa12.15□□□□□ -0.46
RABGGTA-209ENST00000559551 CTDSPLO15194 276 aa12.15□□□□□ -0.46
RABGGTA-209ENST00000559551 TIMM8AO60220 97 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-209ENST00000559551 CRTAPO75718 401 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-209ENST00000559551 CD3GP09693 182 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms