RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 SPACA5Q96QH8 159 aa1.13□□□□□ -2.23
CASC4-210ENST00000559550 THTPAQ9BU02 230 aa1.13□□□□□ -2.23
CASC4-210ENST00000559550 ZMAT5Q9UDW3 170 aaKnown RBP1.13□□□□□ -2.23
CASC4-210ENST00000559550 ZNF443Q9Y2A4 671 aaPredicted RBP1.13□□□□□ -2.23
CASC4-210ENST00000559550 ACOT9Q9Y305 439 aa1.13□□□□□ -2.23
CASC4-210ENST00000559550 NPHP4O75161 1426 aaPredicted RBP1.13□□□□□ -2.23
CASC4-210ENST00000559550 VWDEQ8N2E2 1590 aa1.13□□□□□ -2.23
CASC4-210ENST00000559550 PLEKHG2Q9H7P9 1386 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 ZNF729A6NN14 1252 aaPredicted RBP1.12□□□□□ -2.23
CASC4-210ENST00000559550 SUPT3HB4E1H0 165 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 DFFAO00273 331 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 OVOL1O14753 267 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 HSBP1O75506 76 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 DHRS3O75911 302 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 CDS2O95674 445 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 IGKV1D-33P01593 117 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 IGKV1-33P01594 117 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 FGF4P08620 206 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 ANXA8P13928 327 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 GABRR2P28476 465 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 LAMTOR4Q0VGL1 99 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 LGALSLQ3ZCW2 172 aaPredicted RBP1.12□□□□□ -2.23
CASC4-210ENST00000559550 ANXA8L1Q5VT79 327 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 EPGNQ6UW88 154 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 TCF24Q7RTU0 167 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 COMMD1Q8N668 190 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 OR4K2Q8NGD2 314 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 OR2K2Q8NGT1 345 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 OR8S1Q8NH09 359 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 BAALCQ8WXS3 180 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 NAT6Q93015 286 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 C20orf166-AS1Q96NR2 134 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 MRPL20Q9BYC9 149 aaKnown RBP1.12□□□□□ -2.23
CASC4-210ENST00000559550 C8orf33Q9H7E9 229 aaPredicted RBP1.12□□□□□ -2.23
CASC4-210ENST00000559550 TRAPPC1Q9Y5R8 145 aa1.12□□□□□ -2.23
CASC4-210ENST00000559550 COL11A1P12107 1806 aaPredicted RBP1.12□□□□□ -2.23
CASC4-210ENST00000559550 SETD1AO15047 1707 aaKnown RBP1.12□□□□□ -2.23
CASC4-210ENST00000559550 PLXNB3Q9ULL4 1909 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 A0A0B4J2C4 111 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 MYBPHLA2RUH7 354 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 TRIM64CA6NLI5 447 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 A8MWP4 228 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 UPK1AO00322 258 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 KLK1P06870 262 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 RHOCP08134 193 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 PMCHP20382 165 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 TUBG1P23258 451 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 PSMB2P49721 201 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 NUDT2P50583 147 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 RAB11AP62491 216 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 RPL10AP62906 217 aaKnown RBP1.11□□□□□ -2.23
CASC4-210ENST00000559550 C2orf54Q08AI8 447 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 DHRS2Q13268 280 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 TTC32Q5I0X7 151 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 FAM231DQ6ZW35 169 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 AMN1Q8IY45 258 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 RPRMLQ8N4K4 120 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 TRIB3Q96RU7 358 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 C20orf144Q9BQM9 153 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 OR2AG1Q9H205 316 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 PORCNQ9H237 461 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 VPS37BQ9H9H4 285 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 TUBG2Q9NRH3 451 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 ZNF337Q9Y3M9 751 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 ORC6Q9Y5N6 252 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 MROH5Q6ZUA9 1318 aa1.11□□□□□ -2.23
CASC4-210ENST00000559550 HELZ2Q9BYK8 2649 aaKnown RBP1.1□□□□□ -2.23
CASC4-210ENST00000559550 C9JQL5 133 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 K7EPK0 472 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 FFAR1O14842 300 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 CASQ2O14958 399 aaPredicted RBP1.1□□□□□ -2.23
CASC4-210ENST00000559550 OR2A4O95047 310 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 SNRPAP09012 282 aaKnown RBP1.1□□□□□ -2.23
CASC4-210ENST00000559550 CSRP1P21291 193 aaKnown RBP1.1□□□□□ -2.23
CASC4-210ENST00000559550 MAGEA1P43355 309 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 HCCSP53701 268 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 SLC18A1P54219 525 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 MLF1P58340 268 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 TMEM241Q24JQ0 296 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 MLIPQ5VWP3 458 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 CLEC19AQ6UXS0 136 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 CYHR1Q6ZMK1 362 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 Q6ZQT7 251 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 CPNE9Q8IYJ1 553 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 ZFP82Q8N141 532 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 Q8NAQ8 132 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 GPX8Q8TED1 209 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 GLYATL2Q8WU03 294 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 SMIM8Q96KF7 97 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 OR2A7Q96R45 310 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 ASB7Q9H672 318 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 TAC3Q9UHF0 121 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 PRO0628Q9UI54 55 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 VWA8A3KMH1 1905 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 ICE1Q9Y2F5 2266 aa1.1□□□□□ -2.23
CASC4-210ENST00000559550 A0A1B0GU33 70 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 GMNCA6NCL1 334 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 PSCAO43653 123 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 CGB3P0DN86 165 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 CGB7P0DN87 165 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms