RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 FAM90A16PA6NEW6 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A20PA6NIJ5 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A8PA6NJQ4 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 SLC22A20A6NK97 555 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A7PA6NKC0 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A22PA8MWA6 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A12PA8MX19 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A5PA8MXJ8 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A23PA8MXZ1 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM25EA8MYX2 175 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 CST4P01036 141 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 HLA-HP01893 362 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A15PP0C7V4 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A13PP0C7W8 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A14PP0C7W9 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAM90A24PP0C7X0 464 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 CCNOP22674 350 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 CHATP28329 748 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 MPGP29372 298 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 C9orf135Q5VTT2 229 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 AADACL3Q5VUY0 350 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 DEFB124Q8NES8 71 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 PPP1R1CQ8WVI7 109 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 ZNF552Q9H707 407 aaPredicted RBP9.76□□□□□ -0.85
CLPX-204ENST00000559152 NECAP2Q9NVZ3 263 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 ZNF230Q9UIE0 474 aaPredicted RBP9.76□□□□□ -0.85
CLPX-204ENST00000559152 KANTRA0A1W2PQU2 76 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 C5orf51A6NDU8 294 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 ZNF850A8MQ14 1090 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 PLATP00750 562 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 APLNRP35414 380 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 TNFSF10P50591 281 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 AP2S1P53680 142 aaPredicted RBP9.76□□□□□ -0.85
CLPX-204ENST00000559152 TCF15Q12870 199 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 FBXW9Q5XUX1 488 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 ACOT7LQ6ZUV0 252 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 KCNRGQ8N5I3 272 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 OR5L1Q8NGL2 311 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 ANGPTL6Q8NI99 470 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 SEC22AQ96IW7 307 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 HIST1H2AAQ96QV6 131 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 RTBDNQ9BSG5 229 aaPredicted RBP9.76□□□□□ -0.85
CLPX-204ENST00000559152 FAAP24Q9BTP7 215 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 AK3Q9UIJ7 227 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 TNFSF18Q9UNG2 199 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 ST3GAL6Q9Y274 331 aa9.76□□□□□ -0.85
CLPX-204ENST00000559152 SDCBPO00560 298 aaPredicted RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 PSMB6P28072 239 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 UBA52P62987 128 aaKnown RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 TGIF1Q15583 401 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 CEACAM21Q3KPI0 293 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 ATP1A1-AS1Q5TC04 95 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 SIGIRRQ6IA17 410 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 IGF2-ASQ6U949 168 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 CLEC18BQ6UXF7 455 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 NUFIP2Q7Z417 695 aaKnown RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 ZDHHC23Q8IYP9 409 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 FBXL14Q8N1E6 418 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 ZNF611Q8N823 705 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 INO80EQ8NBZ0 244 aaPredicted RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 Q8NFD4 153 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 TMEM230Q96A57 120 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 POM121L2Q96KW2 1035 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 PAPOLGQ9BWT3 736 aaKnown RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 DECR2Q9NUI1 292 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 IGKV1-12A0A0C4DH73 117 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 A0A1B0GW55 424 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 PQLC2LA1A4F0 135 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 CCSO14618 274 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 GEMIN2O14893 280 aaKnown RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 SS18L1O75177 396 aaPredicted RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 PDCD6O75340 191 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 IGKV1D-12P01611 117 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 DUX4L2P0CJ85 424 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 DUX4L3P0CJ86 424 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 DUX4L4P0CJ87 422 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 DUX4L5P0CJ88 424 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 DUX4L6P0CJ89 424 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 DUX4L7P0CJ90 424 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 RRASP10301 218 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 PGAM2P15259 253 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 RBM11P57052 281 aaKnown RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 PRDX4Q13162 271 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 CLN3Q13286 438 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 TMEM211Q6ICI0 200 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 COMMD7Q86VX2 200 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 OR10AD1Q8NGE0 317 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 OR56B2PQ8NGI1 322 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 OR1K1Q8NGR3 316 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 GMPPAQ96IJ6 420 aaPredicted RBP9.75□□□□□ -0.85
CLPX-204ENST00000559152 PARD6AQ9NPB6 346 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 MED9Q9NWA0 146 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 DUX4Q9UBX2 424 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 LIPGQ9Y5X9 500 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 FREM2Q5SZK8 3169 aa9.75□□□□□ -0.85
CLPX-204ENST00000559152 C13orf42A0A1B0GVH6 325 aa9.74□□□□□ -0.85
CLPX-204ENST00000559152 EEF1E1-BLOC1S5C9J1V9 151 aa9.74□□□□□ -0.85
CLPX-204ENST00000559152 J3QW42 95 aa9.74□□□□□ -0.85
CLPX-204ENST00000559152 CTSDP07339 412 aaPredicted RBP9.74□□□□□ -0.85
CLPX-204ENST00000559152 FCGR3AP08637 254 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms