RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 ZIK1Q3SY52 487 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 TMEM42Q69YG0 159 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 ACP7Q6ZNF0 438 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 REC114Q7Z4M0 266 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 CATSPERDQ86XM0 798 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 LDLRAD3Q86YD5 345 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 PDZD9Q8IXQ8 264 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 CBR4Q8N4T8 237 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 CCDC54Q8NEL0 328 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 C8orf46Q8TAG6 207 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 HRASLS5Q96KN8 279 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 C9orf16Q9BUW7 83 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 SIRT7Q9NRC8 400 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 RASL12Q9NYN1 266 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 SLC7A11Q9UPY5 501 aa9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 CAB39Q9Y376 341 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-205ENST00000559080 IGKV1D-17A0A075B6S4 117 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 TRBV23-1A0A0A0MS06 115 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 PQLC2LA1A4F0 135 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 A6NIN4 97 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 H3BSH0 61 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 SYNGR1O43759 233 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 ENTPD6O75354 484 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 TSPAN9O75954 239 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 PGA5P0DJD9 388 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 EEF1B2P24534 225 aaKnown RBP9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 SNRPGP62308 76 aaKnown RBP9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 TP53I3Q53FA7 332 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 MEDAGQ5VYS4 303 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 METAP1DQ6UB28 335 aaPredicted RBP9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 Q6ZSR3 168 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 FAM185AQ8N0U4 392 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 ZNRF1Q8ND25 227 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 TRMT10AQ8TBZ6 339 aaKnown RBP9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 MRAPQ8TCY5 172 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 NPRL2Q8WTW4 380 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 RORBQ92753 470 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 RNFT2Q96EX2 444 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 SDSLQ96GA7 329 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 ZNF488Q96MN9 340 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 ELL3Q9HB65 397 aaPredicted RBP9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 ZNF222Q9UK12 451 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 FAM96BQ9Y3D0 163 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 GMPPBQ9Y5P6 360 aa9.18□□□□□ -0.94
CHRNA3-205ENST00000559080 A0A0U1RQK1 487 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 FAM230AA0A1W2PPH8 454 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 DAPL1A0PJW8 107 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 RFPL4AA6NLU0 287 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 RFPL4AL1F8VTS6 287 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 M0R1W7 72 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 SERPINA3P01011 423 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 FBP1P09467 338 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 ACTA2P62736 377 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 ACTG2P63267 376 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 ZNF85Q03923 595 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 CNN3Q15417 329 aaKnown RBP9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 NCR3LG1Q68D85 454 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 BATF2Q8N1L9 274 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 ZNF561Q8N587 486 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 C10orf35Q96D05 121 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 MRPL48Q96GC5 212 aaKnown RBP9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 MYCBPQ99417 103 aaPredicted RBP9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 NRIP2Q9BQI9 281 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 PKIBQ9C010 78 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 CHST5Q9GZS9 411 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 METTL8Q9H825 291 aaKnown RBP9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 OR14J1Q9UGF5 321 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 MAB21L2Q9Y586 359 aa9.17□□□□□ -0.94
CHRNA3-205ENST00000559080 A0A1W2PPH5 198 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 BTBD17A6NE02 478 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 H0YAE9 185 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 SLC16A6O15403 523 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 MPZL2O60487 215 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 NOS1APO75052 506 aaPredicted RBP9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 PAHP00439 452 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 ZNF20P17024 532 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 MPZP25189 248 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 PRDX2P32119 198 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 KIR3DL2P43630 455 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 LOXL3P58215 753 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 ISL1P61371 349 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 IL24Q13007 206 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 KLRD1Q13241 179 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 VAX1Q5SQQ9 334 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 SLC25A30Q5SVS4 291 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 TMEM244Q5VVB8 128 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 GDPGP1Q6ZNW5 385 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 PQLC1Q8N2U9 271 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 PRSS35Q8N3Z0 413 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 PIP4P2Q8N4L2 257 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 ACBD7Q8N6N7 88 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 Q8N7P7 452 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 OR5D13Q8NGL4 314 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 PP6455Q8WZ26 134 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 BORCS8Q96FH0 119 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 S100A14Q9HCY8 104 aa9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHRNA3-205ENST00000559080 A0A1W2PRD5 423 aa9.15□□□□□ -0.94
CHRNA3-205ENST00000559080 A0A1W2PRF3 423 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms